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scnpilot_p_inoc_scaffold_0_curated

Search features with annotation key words

Displaying items 1-30 of 1693 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_0_curated_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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285..1439
DNA (1155bp) protein (385aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B782C3
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ72965.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1529..3820
DNA (2292bp) protein (764aa)
trehalose synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D4B4B
glycosidase
Glycosidase {ECO:0000313|EMBL:BAJ76640.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3947..4414
DNA (468bp) protein (156aa)
ATPase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B64CB1
ATPase
ATPase {ECO:0000313|EMBL:BAJ76639.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4484..5164
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B1C39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB77560.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_p_inoc_scaffold_0_curated_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5221..6906
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346EB75
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_0_curated_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6888..8051
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B4C1F
Uncharacterized protein {ECO:0000313|EMBL:KEP76079.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
GGDEF domain
scnpilot_p_inoc_scaffold_0_curated_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8063..8440)
DNA (378bp) protein (126aa)
chemotaxis protein CheY n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC849
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ76636.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8529..9149
DNA (621bp) protein (207aa)
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
dephospho-CoA kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346EE6D
scnpilot_p_inoc_scaffold_0_curated_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9223..11292
DNA (2070bp) protein (690aa)
UvrABC system protein B n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX5_MICTS
uvrB; helicase subunit of the DNA excision repair complex; K03702 excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11306..11728
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488281
lactoylglutathione lyase; K07032
Lactoylglutathione lyase {ECO:0000313|EMBL:BAJ76633.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11775..12011)
DNA (237bp) protein (79aa)
Rhs family protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX3_MICTS
rhs family protein
Rhs family protein {ECO:0000313|EMBL:BAJ76632.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12046..12480
DNA (435bp) protein (145aa)
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003499051
MarR family transcriptional regulator {ECO:0000313|EMBL:KEP75569.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_0_curated_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12624..15563
DNA (2940bp) protein (980aa)
UvrABC system protein A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX1_MICTS
uvrA; excinuclease ATPase subunit; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15567..17510
DNA (1944bp) protein (648aa)
excinuclease ABC subunit C n=1 Tax=Microbacterium sp. B19 RepID=UPI0003466237
uvrC; nuclease subunit of the excinuclease complex; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17539..18417
DNA (879bp) protein (293aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF076
Nucleotide-binding protein HR12_26325 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
P-loop-containing kinase; K06958 UPF0042 nucleotide-binding protein
scnpilot_p_inoc_scaffold_0_curated_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18501..19478
DNA (978bp) protein (326aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW8_MICTS
hypothetical protein; K09762 hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19651..20277
DNA (627bp) protein (209aa)
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Superoxide dismutase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW7_MICTS
scnpilot_p_inoc_scaffold_0_curated_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20382..21392
DNA (1011bp) protein (337aa)
gap; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW6_MICTS
scnpilot_p_inoc_scaffold_0_curated_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21399..22613
DNA (1215bp) protein (405aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
pgk; 3-phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW5_MICTS
scnpilot_p_inoc_scaffold_0_curated_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22604..23392
DNA (789bp) protein (263aa)
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
triosephosphate isomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367D793
scnpilot_p_inoc_scaffold_0_curated_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23506..23754
DNA (249bp) protein (83aa)
Preprotein translocase subunit SecG n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW3_MICTS
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:BAJ76622.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23756..24109
DNA (354bp) protein (118aa)
RNA polymerase-binding protein RbpA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW2_MICTS
electron transport protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_23
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24162..24905)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JUA2_ARTS2
hypothetical protein
SPG23_c12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28301.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
scnpilot_p_inoc_scaffold_0_curated_24
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24902..26350)
DNA (1449bp) protein (483aa)
polysaccharide deacetylase n=2 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B541DE
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABK02625.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_p_inoc_scaffold_0_curated_25
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26395..28197)
DNA (1803bp) protein (601aa)
glutamine amidotransferase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B35225
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|SAAS:SAAS00039584}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
scnpilot_p_inoc_scaffold_0_curated_26
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28197..29261)
DNA (1065bp) protein (355aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
nucleoside-diphosphate sugar epimerase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6F553
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHD23048.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
scnpilot_p_inoc_scaffold_0_curated_27
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29258..30589)
DNA (1332bp) protein (444aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3D186
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KEP75355.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nucleotide sugar dehydrogenase
scnpilot_p_inoc_scaffold_0_curated_28
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30878..32245
DNA (1368bp) protein (456aa)
UPI0003D6CD40 related cluster n=1 Tax=unknown RepID=UPI0003D6CD40
Glycosyl transferase {ECO:0000313|EMBL:AHD23046.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_0_curated_29
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32198..34726)
DNA (2529bp) protein (843aa)
LuxR family transcriptional regulator n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003615FE5
Uncharacterized protein {ECO:0000313|EMBL:KEP74967.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_0_curated_30
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34914..35705)
DNA (792bp) protein (264aa)
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW1_MICTS
6-phosphogluconolactonase {ECO:0000313|EMBL:KEP74965.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Displaying items 1-30 of 1693 in total

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