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scnpilot_p_inoc_scaffold_0_curated_22

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 23756..24109

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW2_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 238
  • Evalue 3.30e-60
electron transport protein similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 238
  • Evalue 1.00e-60
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 238
  • Evalue 4.60e-60

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGGCCACTGGCGGCAACGCCATCCGCGGCACGCGCGTCGGCGCGGGCCCGATGGGTGAACAGGATCACGGTTTCCACGCCGATCGCGTGGCGGTGTCGTACTGGGACGCACTCGGCAACGAGACCGTCCGCTACTTCGCCGCGGGCATCCCCGACGACGAGATCCCCGAGACGATCGACTCGCCGCACTCCGGCCTTCCCGCCGGCCGCGACAAGAACAACCCCCCGGCTCTGGCCAAGACCGAGCCCTACAAGACGCACCTGGCCTACGTGAAGGAGCGCCGCACCGACGAGGAAGCGGAGTCGCTCCTCGACGATGCGCTGCAGCAGCTGCGCGAGCGTCGGGGCCAGTAA
PROTEIN sequence
Length: 118
MATGGNAIRGTRVGAGPMGEQDHGFHADRVAVSYWDALGNETVRYFAAGIPDDEIPETIDSPHSGLPAGRDKNNPPALAKTEPYKTHLAYVKERRTDEEAESLLDDALQQLRERRGQ*