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scnpilot_p_inoc_scaffold_0_curated_7

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(8063..8440)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC849 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 125.0
  • Bit_score: 213
  • Evalue 9.20e-53
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 122.0
  • Bit_score: 178
  • Evalue 1.00e-42
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ76636.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 122.0
  • Bit_score: 178
  • Evalue 4.60e-42

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCCGAATCCCAACGTCGTGGTCGTCATCGAGGATGACGTCGACATCCGATCGCTCCTCACCGCGACCCTCGAACCGGTGGGTTTCGTCGTACACACGGCCGTCGACGGGCTGACCGGCATCGACACGGTGCGTCGCACGGACCCCGCGGTGACGACCCTCGACGTGAGCATGCCCGGCCTCGACGGCTTCGAGACCGCACGGCGCATCCGCGAGTTCAGCCGGACGCGCATCCTGATGGTGAGTGCCCGCGTGGATGCCACCGAGGAACGGCTGGCCCGCGAGGCCGGCGCCGACGACTACCTCACGAAACCGTTCCGTCCGCGAGAGCTCCGTGCGCGCGTGCACGCCCTCGTGGCCGCCCGGGACGAGGACTGA
PROTEIN sequence
Length: 126
MPNPNVVVVIEDDVDIRSLLTATLEPVGFVVHTAVDGLTGIDTVRRTDPAVTTLDVSMPGLDGFETARRIREFSRTRILMVSARVDATEERLAREAGADDYLTKPFRPRELRARVHALVAARDED*