ggKbase home page

scnpilot_p_inoc_scaffold_120_curated_60

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 55955..57676

Top 3 Functional Annotations

Value Algorithm Source
sigma 54 type regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003464C47 similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 573.0
  • Bit_score: 1062
  • Evalue 0.0
Putative sigma 54 type regulator {ECO:0000313|EMBL:ELQ89429.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 565.0
  • Bit_score: 575
  • Evalue 7.70e-161
sigma 54 type regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 565.0
  • Bit_score: 573
  • Evalue 6.60e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1722
ATGACCCCCACCTCCGCACGGCTCATCGAGCAGGCCAAGAGCGAGATCCTGTCCGCCTCGTCGGCGACGGCCGCCCTCCGCCCCGACCTCGTGACCTCGTGGCAGCGCTCGAAAGAGGCCCTCGGTTCGCCCGATCGCATCCGGGACGTCCCGCAGGTCGGCGTCGACCTCCTCGACCGTCACCTTTTGGAGATGTTCCAGGCCCCGCTCGCCCGCGTCTCCGACGAACTCGACGGCACGGGTCTGGGTCTGCTGCTGGCCGATTCCGAGGGCCGCATCCTGCAGCGCTGGACCCACGACCGCGCCGCCGCAGATCACCTCGATCGGCTCGGCACCGTGCGGGGAGCCGTGCTGTCGGAAGAGACCGTCGGCACGAACGGCGTCGGCACGGTCGCCGCCACCGGACGCAGCGTCCAGATCACCGGCAACGAGCACTTCGCCGAGTTCTACCGCTCGGCGGTGTGCACGGGCAGCCCCGTGCGTCATCCGCTCACCGGGCGACTCCTCGCCGTGATCACGCTGTCCACGCACATCACCGAACGCCCCGAGCTCCTCCGCCCCCTCACCCACTCGATCGCCACGCAGCTCGGCCAGCACGTCATGGATGCCGAGCGCCCGGCGGCCCGCAGCATGCTCGCCGCGTTCCTCGCCGCCTCGCGCGTCCAGCAGGGGCCGGTCGTCGCGCTCGGGCCCGACGGCCTGCTGATGCAGAACCAGCGCGCATCCCGGCTCTCGACCGCGGACATGGCGCTCGTCCAGCGCCTGTGCGCCGAGGAGTCGCGCGGGGGTCGCGTCAACGTCGAACTGTCGTCGGGATACGCCGACGTGCAGGTCACCCGGTTGCAGGACGGGGCCGGCAGCGTCGCGGTCGTCAACGTCGGCGAGCGGCCCGTGACGCACGGCGGCTTCGGCCCGCTCCGCCCCGCCCTCGCCGGGCGGTCGACGGAGTGGCTCGCCGTCGCGCAGACCGTCGCCCGTCACCGCGAGGCGCGCACACCGCTGCTGATCGCGGGCGAGCCGGGCACGGGCAAGACCTCGCTCGCCCTCGGACTGCCGCACCGCCCCGGCGCGGCCCGCGCCGCGACCGTGGTCGACGCGGCCGAGCGTCACGTGCTGGGCGCGCGGCGGTGGTTGCAGCGCCTGTCCGAGCGGCTCGCCGCCGGAGCACCGGTCGTGGTCAAAGGCATCCAGACCCTCGAACCCGGGTCGCTCTCGGGCATGGTGTCGCTCATCGACTCGACGCCGTCGCGCGGCGCCGTGCTGCTCACGCTCTCGGCGGCGGATCGCGCCGAGGCGGGCTCCTTCGCGACCCGCGTCGGCTACCCCACGACGTGGGTGCCGTCGCTGCGGGAACGCTCCGGTGACGTCGGTCCGCTCTGGCGCGCGCTCGCCGACCACGCCGCCTCATCCGCACACCTCGAACCCACGCGTGACGCGCTCTCCGCCCTGGAGGCGCACGCGTGGCCGGGCAACATCGTGGAGCTCCGCAATGTGATCGAGCAGCTCGCCCTGAGCGGTCGCCGCGGTGCGATCGGCGCGGCCGATCTCCCCATGTCGGTCCGCGGGGCGCGCGCCATGACGATGATCGAACGCGCCGAGCTGGAAGCCATCCAGCGCGCGCTGCAGGAAGCGGGCGGCAATCGCTCCCGGGCCGCCGAGATCCTCGGTCTGTCCCGCGCCACGGTCTACCGGAAGATGAAGACGTATCGCCTGACGGCCTGA
PROTEIN sequence
Length: 574
MTPTSARLIEQAKSEILSASSATAALRPDLVTSWQRSKEALGSPDRIRDVPQVGVDLLDRHLLEMFQAPLARVSDELDGTGLGLLLADSEGRILQRWTHDRAAADHLDRLGTVRGAVLSEETVGTNGVGTVAATGRSVQITGNEHFAEFYRSAVCTGSPVRHPLTGRLLAVITLSTHITERPELLRPLTHSIATQLGQHVMDAERPAARSMLAAFLAASRVQQGPVVALGPDGLLMQNQRASRLSTADMALVQRLCAEESRGGRVNVELSSGYADVQVTRLQDGAGSVAVVNVGERPVTHGGFGPLRPALAGRSTEWLAVAQTVARHREARTPLLIAGEPGTGKTSLALGLPHRPGAARAATVVDAAERHVLGARRWLQRLSERLAAGAPVVVKGIQTLEPGSLSGMVSLIDSTPSRGAVLLTLSAADRAEAGSFATRVGYPTTWVPSLRERSGDVGPLWRALADHAASSAHLEPTRDALSALEAHAWPGNIVELRNVIEQLALSGRRGAIGAADLPMSVRGARAMTMIERAELEAIQRALQEAGGNRSRAAEILGLSRATVYRKMKTYRLTA*