ggKbase home page

scnpilot_p_inoc_scaffold_120_curated

Search features with annotation key words

Displaying items 31-60 of 471 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_120_curated_31
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30487..31074)
DNA (588bp) protein (196aa)
Redoxin domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9J0_9MICO
Redoxin domain protein {ECO:0000313|EMBL:EIC06457.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
thiol-disulfide isomerase and thioredoxins
scnpilot_p_inoc_scaffold_120_curated_32
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31071..31403)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9J1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06458.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_33
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31400..31942)
DNA (543bp) protein (181aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB58_9MICO
scnpilot_p_inoc_scaffold_120_curated_34
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32366..32896)
DNA (531bp) protein (177aa)
Putative oxidoreductase CzcO {ECO:0000313|EMBL:KJL45901.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL45901.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3G4_9MICO
K+ transport protein
scnpilot_p_inoc_scaffold_120_curated_35
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(33367..34035)
DNA (669bp) protein (223aa)
DSBA oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI00035CEEC8
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_120_curated_36
unknown

Not on your lists

comp(34115..34549)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_120_curated_37
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34661..35602)
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=1 Tax=Microbacterium sp. TS-1 RepID=U2YVR2_9MICO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:GAD34688.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
putative cobalt-zinc-cadmium efflux protein; K03295 cation efflux system protein, CDF family
scnpilot_p_inoc_scaffold_120_curated_38
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36246..36488)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2E348
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93781.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_39
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36566..36814
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B336E1
Uncharacterized protein {ECO:0000313|EMBL:KJL40863.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_p_inoc_scaffold_120_curated_40
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37331..37528)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8K0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06782.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_120_curated_41
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37716..38519)
DNA (804bp) protein (268aa)
ABC transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000346CACF
multidrug ABC transporter permease; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_42
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38516..39526)
DNA (1011bp) protein (337aa)
IclR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3A6A1
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:BAJ74807.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_43
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(39755..41143)
DNA (1389bp) protein (463aa)
glyS; glycyl-tRNA synthetase (class II); K01880 glycyl-tRNA synthetase [EC:6.1.1.14]
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycine-tRNA synthetase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI0003468861
scnpilot_p_inoc_scaffold_120_curated_44
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41201..41881)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CNQ9_CLAM3
Uncharacterized protein {ECO:0000313|EMBL:AJW78247.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_45
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41878..43011)
DNA (1134bp) protein (378aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_01933};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_01933}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
L-alanine-DL-glutamate epimerase; K02549 O-succinylbenzoate synthase [EC:4.2.1.113]
O-succinylbenzoate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B420E
scnpilot_p_inoc_scaffold_120_curated_46
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43275..44084
DNA (810bp) protein (270aa)
dehydrogenase with different specificities; K00540 [EC:1.-.-.-]
oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003492A96
Dehydrogenase with different specificities {ECO:0000313|EMBL:BAJ74795.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_47
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44089..44298
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034791F8
cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:BAJ74794.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_48
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44300..44992)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CD025
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ74793.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_49
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45135..45539
DNA (405bp) protein (135aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBV9_MICTS
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ74792.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_50
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45582..46898)
DNA (1317bp) protein (439aa)
MFS transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B523AD
MFS transporter {ECO:0000313|EMBL:KEP74603.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_120_curated_51
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47062..47988
DNA (927bp) protein (309aa)
formyltetrahydrofolate hydrolase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate hydrolase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBV6_MICTS
Formyltetrahydrofolate hydrolase {ECO:0000313|EMBL:BAJ74789.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_52
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48170..48694
DNA (525bp) protein (175aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B8ED7
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAJ74781.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_53
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48691..49890
DNA (1200bp) protein (400aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBU7_MICTS
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ74780.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_54
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50026..50913)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBV5_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP74602.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_55
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50928..51203)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000349B276
Uncharacterized protein {ECO:0000313|EMBL:KEP74601.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_56

Not on your lists

comp(51307..52248)
DNA (942bp) protein (314aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003478AAE
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KGA21646.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
3-hydroxyacyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_120_curated_57
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52245..53516)
DNA (1272bp) protein (424aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:ELQ89427.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ELQ89427.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B3714
Fe-dependent alcohol dehydrogenase
scnpilot_p_inoc_scaffold_120_curated_58
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53513..55006)
DNA (1494bp) protein (498aa)
succinate semialdehyde dehydrogenase (EC:1.2.1.16)
aldehyde dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003452100
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EJZ08977.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
scnpilot_p_inoc_scaffold_120_curated_59

Not on your lists

55114..55821
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D09B6
Uncharacterized protein {ECO:0000313|EMBL:KGA21647.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_120_curated_60
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55955..57676
DNA (1722bp) protein (574aa)
sigma 54 type regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003464C47
Putative sigma 54 type regulator {ECO:0000313|EMBL:ELQ89429.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
sigma 54 type regulator
Displaying items 31-60 of 471 in total

View Taxonomy