ggKbase home page

scnpilot_p_inoc_scaffold_0_curated_266

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 290374..290940

Top 3 Functional Annotations

Value Algorithm Source
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 5.10e-102
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 2.30e-101
polypeptide deformylase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349F297 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 188.0
  • Bit_score: 379
  • Evalue 1.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGGCCGTTCTCCCTATCCGCATCATGGGCGATCCCGTCCTGCACGCCCCCGCTGCCCGCGTCGACGAGATCACCGACGAGATCCGCACGCTGGTCGCCGACATGTTCGAGACGATGGATGCCGCCCCCGGCGTCGGTCTCGCCGCCCCCCAGGTCGGCGTGGGCCTGCGGATCTTCACGTACACGTACGAAGACGACGAGGGTCGACCGTGGCGCGGGGTGGTCATCAACCCCGAGCTGTGGATCCGCCCGCTCGAGCCGGGCTACCCCGATCCGGACGAAGAGTCCGAGGGATGCCTCTCGTTCCCCGGCGAGCGGTTCCCGCTCCGTCGTTCCGAGGCGGCGCTGCTGACGGGCGTCGATCTCGAGGGCGAGCCCGTGCGCATCGAGGTGTCCGGCTGGCGTGCTCGCATCCTGCAGCACGAGTTCGACCACCTCGACGGCGTGCTCTACGTCGATCGCCTCGACGAGGAGGACAGCCGGATCGTCGCGAAGATCGCCAAGAAGCGCAAGTGGGGAAAGCCGGGCGCGTCCTGGATGCCGGGCGTCGACGACATCGACGCCTGA
PROTEIN sequence
Length: 189
VAVLPIRIMGDPVLHAPAARVDEITDEIRTLVADMFETMDAAPGVGLAAPQVGVGLRIFTYTYEDDEGRPWRGVVINPELWIRPLEPGYPDPDEESEGCLSFPGERFPLRRSEAALLTGVDLEGEPVRIEVSGWRARILQHEFDHLDGVLYVDRLDEEDSRIVAKIAKKRKWGKPGASWMPGVDDIDA*