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scnpilot_p_inoc_scaffold_0_curated_361

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(390446..391864)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein GntR HTH n=1 Tax=Microbacterium sp. B19 RepID=UPI0003463ADF similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 472.0
  • Bit_score: 817
  • Evalue 5.20e-234
MocR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 472.0
  • Bit_score: 690
  • Evalue 5.20e-196
Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs {ECO:0000313|EMBL:BAJ76271.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 472.0
  • Bit_score: 690
  • Evalue 2.30e-195

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGGACTCCCGCATCTCCGCGCGTGCCCTCGCCGAAGCGCTCGGTGGGTGGCGCGGCCGCGGCCCCGCGTACGAAGCGCTGGCCGACGGCATCCGCCTGCTCTGCCTCGACAACCGCATCGCCGCGCGCACAACGCTGCCGGCGGAGCGCGAGCTCGCCACGGCCCTGGGCTTGAGCCGCACCACCGTGGCCGCCACCTATCGGAGCCTGCGCGACAGCGGTCACATCGAGAGCCTGCGGGGGAGTGGAAGCGTCACCCTGCCGCTGCGACGCAACGACCCGGGCGCGGGCGAACGGCGCGACGGCGTCATCGACCTGCAGCAGGCCAGCCCCGCCGCCTGGCCCGGTCTGCCGGCGGTCATCACCGACGTGGCTCAGGATGCCACCGCACTCGTCGCCCGCACCGGCTACGACGTCGTCGGGGAGCCGGGGCTGCGCGAGGAGATCGCGCAGCACTACCGCGATCGTGGACTTGCGACCGACCCCGAGCAGATCCTCGTCACGACGGGGGCGCAGAGCGCGCTGCATCTCATCGCCTCGGTGCTGCTGTCGCGTGCCGACCGCGTCCTGATCGAGACGCCGACCTACCCGCACGGCGCGGACGCTTTCCGCGGCGCCGGCGCCCGCCTCGTCGGCGTTCCCGTCTCCCCGGACGACGGGTGGGATCTCGACCGGGCGGCGCAGACCTTCGCGCGGGTCCTGCCCGCGCTGGCGTACCTCATGCCCGAGTTCCAGAACCCGACCGGTCGGACCATGGGCGATGCGGAGGTGGCGGCGTTCGTCGACGGCGCGCAGCGCGCGGGGACCTACCTCGTACTCGACGAGACGACCGCGGGGCTGGACATCGACCGACCGACCGCACCCGTCGCGTTCCCCGATCTCGGTCGGATCCTGCGGGTCGGGTCGCTCGGCAAGACCGTGTGGGGCGGCTTGCGCGTCGGATGGGTCCGGGCGGAGTCGGACATCATCCGGCGCCTCGCGAGTGGACGCTCCGTACACGACCTGGGCACCCCCGAGTTCGAGCAGGCCGTGGCGGCGAAGGTGCTGCACCGCCTCGATGAGATCAGTGCGCAGCGCGCCGACCTGCTGCGCGACGGCCGCGACGCGCTCACCCGCGCCTTGACGGAGCACTTCCCCGAATGGGAGATCCCGACCGTGCACGGCGGTGTGTCGCTCTGGGTCGGTCTCGGAGAACCGGTCAGCACGCCGCTCGTGATGAGTGCGCGGGCGCGCGGGCTCCTCCTGTCGGCCGGCTCGCGATTCGCCGTCGAAGGGGGACACGACCGACGCTTGCGCATCCCCTTCACCGCCGCACCGCACACCCTCGAGCGGGCCGTCGGCATCTTGCGGACGGCGTGGGACGACGTCCGCGGGACGGCCGCGGGCGCGGCGCTCGACGATCTCGCGACCGTGGTCTGA
PROTEIN sequence
Length: 473
MDSRISARALAEALGGWRGRGPAYEALADGIRLLCLDNRIAARTTLPAERELATALGLSRTTVAATYRSLRDSGHIESLRGSGSVTLPLRRNDPGAGERRDGVIDLQQASPAAWPGLPAVITDVAQDATALVARTGYDVVGEPGLREEIAQHYRDRGLATDPEQILVTTGAQSALHLIASVLLSRADRVLIETPTYPHGADAFRGAGARLVGVPVSPDDGWDLDRAAQTFARVLPALAYLMPEFQNPTGRTMGDAEVAAFVDGAQRAGTYLVLDETTAGLDIDRPTAPVAFPDLGRILRVGSLGKTVWGGLRVGWVRAESDIIRRLASGRSVHDLGTPEFEQAVAAKVLHRLDEISAQRADLLRDGRDALTRALTEHFPEWEIPTVHGGVSLWVGLGEPVSTPLVMSARARGLLLSAGSRFAVEGGHDRRLRIPFTAAPHTLERAVGILRTAWDDVRGTAAGAALDDLATVV*