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scnpilot_p_inoc_scaffold_625_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_625_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..2135
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AC827
Uncharacterized protein {ECO:0000313|EMBL:EGK02205.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
peptidase
scnpilot_p_inoc_scaffold_625_curated_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2363..3907
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3A0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72578.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
secreted sulfatase ydeN rbh
scnpilot_p_inoc_scaffold_625_curated_3
Prevotella sp. CAG:617, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3972..6353
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:617 RepID=R7P719_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDF21514.1}; TaxID=1262933 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:617.;"
hypothetical protein
scnpilot_p_inoc_scaffold_625_curated_4
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6360..7301)
DNA (942bp) protein (314aa)
ApbE family lipoprotein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R0A2_PIRSD
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ADB14770.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
scnpilot_p_inoc_scaffold_625_curated_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7302..7544)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7K9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92848.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
scnpilot_p_inoc_scaffold_625_curated_6
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7531..8799)
DNA (1269bp) protein (423aa)
Tat (Twin-arginine translocation) pathway signal sequence n=4 Tax=Bacteroides RepID=I9AF17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN05323.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Predicted dehydrogenases and related proteins
scnpilot_p_inoc_scaffold_625_curated_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8869..12939)
DNA (4071bp) protein (1357aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HBA8_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS01086.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
histidine kinase
scnpilot_p_inoc_scaffold_625_curated_8
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13153..15669
DNA (2517bp) protein (839aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y3V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00097.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
scnpilot_p_inoc_scaffold_625_curated_9
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15686..18982
DNA (3297bp) protein (1099aa)
TonB-dependent receptor plug domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NFD3_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:GAO30831.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_p_inoc_scaffold_625_curated_10
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18997..20556
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RR48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY45088.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
RagB/SusD family protein
scnpilot_p_inoc_scaffold_625_curated_11
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20568..22460
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RD04_9BACE
Transforming growth factor-beta induced protein IG-H3 {ECO:0000313|EMBL:GAO30833.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_625_curated_12
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22484..24028
DNA (1545bp) protein (515aa)
Fasciclin domain protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QZ30_9BACT
Fasciclin domain protein {ECO:0000313|EMBL:CCZ02371.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_625_curated_13
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24049..27159
DNA (3111bp) protein (1037aa)
TonB-dependent receptor n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAL1_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:CCZ00778.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
outer membrane cobalamin receptor protein
scnpilot_p_inoc_scaffold_625_curated_14
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27167..28816
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8X4P9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY45092.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
RagB/SusD family protein
scnpilot_p_inoc_scaffold_625_curated_15
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28856..31642
DNA (2787bp) protein (929aa)
LamG domain protein jellyroll fold domain protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D0K1_PREDD
hypothetical protein
LamG domain protein jellyroll fold domain protein {ECO:0000313|EMBL:EGQ16530.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB27774.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
scnpilot_p_inoc_scaffold_625_curated_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31649..35176
DNA (3528bp) protein (1176aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NT51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00521.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
scnpilot_p_inoc_scaffold_625_curated_17
unknown

Not on your lists

35208..37535
DNA (2328bp) protein (776aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_625_curated_18
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37584..38243
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Z5J9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY70725.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
spore coat protein CotH
scnpilot_p_inoc_scaffold_625_curated_19
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38322..39557
DNA (1236bp) protein (412aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Z5J9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY70725.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
scnpilot_p_inoc_scaffold_625_curated_20
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39568..41109
DNA (1542bp) protein (514aa)
Endo-polygalacturonase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K245_9BACE
Endo-polygalacturonase {ECO:0000313|EMBL:EFI40794.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
transmembrane protein
scnpilot_p_inoc_scaffold_625_curated_21
unknown

Not on your lists

comp(41069..41185)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_625_curated_22
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41209..42609
DNA (1401bp) protein (467aa)
Endo-polygalacturonase n=3 Tax=Bacteroides RepID=D7IK80_9BACE
Endo-polygalacturonase {ECO:0000313|EMBL:EFI02095.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Endopolygalacturonase
scnpilot_p_inoc_scaffold_625_curated_23
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42623..44866
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CHK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS34223.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_625_curated_24
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44876..47509
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C996_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31245.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
beta-galactosidase rbh
scnpilot_p_inoc_scaffold_625_curated_25
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47575..48126
DNA (552bp) protein (184aa)
acetyltransferase-like protein; K03817 ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037DF9F2
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_p_inoc_scaffold_625_curated_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48095..49300)
DNA (1206bp) protein (402aa)
gliding motility-associated lipoprotein GldJ id=4565194 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
sulfatase-modifying factor protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_625_curated_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49446..50306
DNA (861bp) protein (287aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase {ECO:0000313|EMBL:ADQ80063.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ADQ80063.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Dihydropteroate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5R9_PALPW
scnpilot_p_inoc_scaffold_625_curated_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50318..51103
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5R8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80062.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_625_curated_29
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54015..54896)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X7X6_CELAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV47569.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
Displaying 29 items

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