ggKbase home page

scnpilot_p_inoc_scaffold_20_curated

Search features with annotation key words

Displaying items 91-120 of 344 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_20_curated_91
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

136030..138384
DNA (2355bp) protein (785aa)
Formate C-acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54]
acetyltransferase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002D5624C
Formate C-acetyltransferase {ECO:0000313|EMBL:CDB06284.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
scnpilot_p_inoc_scaffold_20_curated_92
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

138389..139789
DNA (1401bp) protein (467aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 id=4018518 bin=GWF2_Bacteroidetes_49_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_20_curated_93

Not on your lists

139896..141410
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y4K7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32257.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_20_curated_94
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(141391..142179)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1M3_PALPW
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_20_curated_95
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(142188..142757)
DNA (570bp) protein (190aa)
id=4263678 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_96
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

143025..145388
DNA (2364bp) protein (788aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5H4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79968.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_97
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

145477..146286
DNA (810bp) protein (270aa)
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_20_curated_98
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

146340..148076
DNA (1737bp) protein (579aa)
glycosyl hydrolase family protein id=2779919 bin=GWF2_Bacteroidetes_41_31 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
glycosidase
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_20_curated_99
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148104..149591)
DNA (1488bp) protein (496aa)
glucan endo-1,6-beta-glucosidase; K01201 glucosylceramidase [EC:3.2.1.45]
Glucan endo-1,6-beta-glucosidase id=3214362 bin=GWF2_Bacteroidetes_49_14 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_20_curated_100
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(149551..150984)
DNA (1434bp) protein (478aa)
glycoside hydrolase 30; K01201 glucosylceramidase [EC:3.2.1.45]
Putative uncharacterized protein id=3214365 bin=GWF2_Bacteroidetes_49_14 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_20_curated_101
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(151165..152583)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein id=3214368 bin=GWF2_Bacteroidetes_49_14 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_20_curated_102
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(152605..154131)
DNA (1527bp) protein (509aa)
membrane protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DA47
Uncharacterized protein {ECO:0000313|EMBL:GAO29697.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
SusD family.
scnpilot_p_inoc_scaffold_20_curated_103
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(154144..157149)
DNA (3006bp) protein (1002aa)
TonB-linked outer membrane protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237B8F7
SusC, outer membrane protein {ECO:0000313|EMBL:GAO29698.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Outer membrane receptor proteins, mostly Fe transport
scnpilot_p_inoc_scaffold_20_curated_104
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(157161..159458)
DNA (2298bp) protein (766aa)
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXP0_SOLCM
beta-glucosidase-like glycosyl hydrolase
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:AFD05455.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_20_curated_105
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159699..160430
DNA (732bp) protein (244aa)
NUDIX hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T126_PALPW
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADQ78407.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_106
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160427..160753)
DNA (327bp) protein (109aa)
Glutathione synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T127_PALPW
glutathione synthetase; K15383 MtN3 and saliva related transmembrane protein
Glutathione synthetase {ECO:0000313|EMBL:ADQ78408.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_107
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(160795..162018)
DNA (1224bp) protein (408aa)
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_108
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162226..163866)
DNA (1641bp) protein (547aa)
RagB/SusD domain protein id=1747263 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ragb/susd domain protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_20_curated_109
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163888..166950)
DNA (3063bp) protein (1021aa)
TonB-dependent receptor id=1747262 bin=GWD2_Bacteroidales_45_23 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
tonb-dependent receptor
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_20_curated_110
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

167216..168250
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8N4_PALPW
transcriptional regulator, laci family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADQ81143.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_111
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168265..169584
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8N5_PALPW
major facilitator superfamily mfs_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADQ81144.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_112
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

169589..171454
DNA (1866bp) protein (622aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DKM8_9PORP
alpha amylase catalytic subunit
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_113
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

171460..173829
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5USQ0_9PORP
alpha-amylase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_114
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173831..175372
DNA (1542bp) protein (514aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T808_PALPW
carbohydrate kinase, yjef related protein
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ADQ80852.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_115
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(175369..178257)
DNA (2889bp) protein (963aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6D1Q1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA82608.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
Y_Y_Y domain-containing protein
scnpilot_p_inoc_scaffold_20_curated_116
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

178591..181740
DNA (3150bp) protein (1050aa)
Putative uncharacterized protein id=1904196 bin=GWE2_Bacteroidetes_42_39 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-linked outer membrane protein, SusC/RagA family
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_20_curated_117
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

181767..183296
DNA (1530bp) protein (510aa)
Putative uncharacterized protein id=4601014 bin=GWF2_Bacteroidetes_42_66 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_20_curated_118
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

183400..185613
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XMS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAK36385.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
scnpilot_p_inoc_scaffold_20_curated_119
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

185624..187396
DNA (1773bp) protein (591aa)
alpha-glucosidase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6968
Maltodextrin glucosidase {ECO:0000313|EMBL:GAK36384.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
alpha-glucosidase
scnpilot_p_inoc_scaffold_20_curated_120
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(187453..188289)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7Z5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80839.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 91-120 of 344 in total

View Taxonomy