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scnpilot_p_inoc_scaffold_20_curated

Search features with annotation key words

Displaying items 151-180 of 344 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_20_curated_151
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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218592..220109
DNA (1518bp) protein (506aa)
glutamyL-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T428_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_152
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

220106..221422
DNA (1317bp) protein (439aa)
Glycosyl transferase, group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T426_PALPW
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ADQ79470.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_153
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221419..222543
DNA (1125bp) protein (375aa)
udp-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T425_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_154
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

222555..223223
DNA (669bp) protein (223aa)
Methyltransferase type 12 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T424_PALPW
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ADQ79468.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_155
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

223220..224233
DNA (1014bp) protein (338aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T423_PALPW
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ79467.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_156
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(224230..225387)
DNA (1158bp) protein (386aa)
hypothetical protein CSBG_01259 id=4666484 bin=GWF2_Bacteroidetes_35_48 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
group 1 glycosyl transferase
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_p_inoc_scaffold_20_curated_157
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(225384..226847)
DNA (1464bp) protein (488aa)
Polysaccharide biosynthesis protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T419_PALPW
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADQ79463.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_158
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(226847..227773)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T418_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_159
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(227785..230541)
DNA (2757bp) protein (919aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CK72_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_160
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

230624..231316
DNA (693bp) protein (231aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T416_PALPW
CoA-binding protein; K01926 redox-sensing transcriptional repressor
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_161
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

231313..231924
DNA (612bp) protein (204aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T415_PALPW
fumarylacetoacetate (faa) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ADQ79459.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_162
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

232002..235409
DNA (3408bp) protein (1136aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T414_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_163
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

235459..236649
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T413_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79457.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_164
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

236655..237143
DNA (489bp) protein (163aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Tannerella sp. CAG:118 RepID=R5I417_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_165
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

237245..238783
DNA (1539bp) protein (513aa)
Mg chelatase, subunit ChlI n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T409_PALPW
mg chelatase, subunit chli; K07391 magnesium chelatase family protein
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ADQ79453.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_166
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

238819..239946
DNA (1128bp) protein (376aa)
lipid-a-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8P8_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_167
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239952..241181
DNA (1230bp) protein (410aa)
Lipid A 3-O-deacylase-related protein id=4363208 bin=GWF2_Bacteroidetes_40_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_p_inoc_scaffold_20_curated_168
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(241202..242098)
DNA (897bp) protein (299aa)
phosphate butyryltransferase (EC:2.3.1.19); K00634 phosphate butyryltransferase [EC:2.3.1.19]
Phosphate butyryltransferase {ECO:0000313|EMBL:ADQ81158.1}; EC=2.3.1.19 {ECO:0000313|EMBL:ADQ81158.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phosphate butyryltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8P9_PALPW
scnpilot_p_inoc_scaffold_20_curated_169
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

242252..245464
DNA (3213bp) protein (1071aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8Q1_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_170
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

245468..246076
DNA (609bp) protein (203aa)
Polysaccharide deacetylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8Q2_PALPW
polysaccharide deacetylase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_20_curated_171
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246105..247388
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8Q3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81162.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_172
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

247402..249201
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8Q4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81163.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_20_curated_173
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(249207..249806)
DNA (600bp) protein (200aa)
crossover junction endodeoxyribonuclease ruvc (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3V2_PALPW
scnpilot_p_inoc_scaffold_20_curated_174
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(249809..250117)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J2A3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE58044.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
hypothetical protein
scnpilot_p_inoc_scaffold_20_curated_175
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(250410..252422)
DNA (2013bp) protein (671aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003635851
glycoside hydrolase family 3 domain protein
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:CCG98122.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_20_curated_176
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(252460..254562)
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WU43_BACF6
hypothetical protein
Putative 2,6-beta-D-fructofuranosidase {ECO:0000313|EMBL:EXZ18472.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
scnpilot_p_inoc_scaffold_20_curated_177
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(254832..255917)
DNA (1086bp) protein (362aa)
Transcriptional Regulator, AraC family protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZLU5_9BACT
Transcriptional Regulator, AraC family protein {ECO:0000313|EMBL:EON75066.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
regulatory helix-turn-helix protein, AraC family
scnpilot_p_inoc_scaffold_20_curated_178
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

256029..256601
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] rbh
DNA-3-methyladenine glycosylase I n=2 Tax=Bacteroides massiliensis RepID=U6RQI2_9BACE
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EOA58735.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
scnpilot_p_inoc_scaffold_20_curated_179
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

256639..257298
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA15883.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Putative uncharacterized protein id=2117699 bin=GWD2_Bacteroidales_45_23 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Hly-III family protein; K11068 hemolysin III
scnpilot_p_inoc_scaffold_20_curated_180
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(257315..257584)
DNA (270bp) protein (90aa)
toxin HipA n=1 Tax=Pedobacter arcticus RepID=UPI0002FE44F5
HipA domain-containing protein {ECO:0000313|EMBL:CDS93855.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
addiction module toxin protein HipA
Displaying items 151-180 of 344 in total

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