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scnpilot_p_inoc_scaffold_28_curated

Search features with annotation key words

Displaying items 271-300 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_28_curated_271
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(335297..337060)
DNA (1764bp) protein (588aa)
amp-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8J3_PALPW
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ81037.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_272
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(337145..337912)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T655_PALPW
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ADQ80199.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_273
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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338013..339365
DNA (1353bp) protein (451aa)
Penicillin-binding protein, beta-lactamase class C id=1840438 bin=GWE2_Bacteroidetes_42_39 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
beta-lactamase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_274
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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339368..341359
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P2D8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ10700.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
alpha-glucosidase rbh
scnpilot_p_inoc_scaffold_28_curated_275
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(341369..342544)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2B5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78859.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_276
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(342778..343452)
DNA (675bp) protein (225aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003767820
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EXZ78240.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
scnpilot_p_inoc_scaffold_28_curated_277
unknown

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comp(343554..344966)
DNA (1413bp) protein (471aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_278
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(344994..347351)
DNA (2358bp) protein (786aa)
Efflux ABC transporter permease protein n=1 Tax=Bacteroides intestinalis CAG:564 RepID=R5LWU6_9BACE
putative transporter permease protein
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_p_inoc_scaffold_28_curated_279
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(347457..349736)
DNA (2280bp) protein (760aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037BA90C
Uncharacterized protein {ECO:0000313|EMBL:KGN74040.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
ABC transporter membrane protein
scnpilot_p_inoc_scaffold_28_curated_280
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(349828..351141)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BD040
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KKB52098.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
scnpilot_p_inoc_scaffold_28_curated_281
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(351199..352656)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368F514
Outer membrane efflux protein {ECO:0000313|EMBL:EDN87279.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein TolC rbh
scnpilot_p_inoc_scaffold_28_curated_282
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

352885..354246
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B1E61
Uncharacterized protein {ECO:0000313|EMBL:KKB55058.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
two-component system response regulator
scnpilot_p_inoc_scaffold_28_curated_283
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

354383..355387
DNA (1005bp) protein (335aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D5AFD
two-component system sensor histidine kinase
scnpilot_p_inoc_scaffold_28_curated_284
unknown

Not on your lists

356132..356293
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_285
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(356342..356923)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C6G4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ42034.1}; Flags: Fragment;; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
tyrosine type site-specific recombinase
scnpilot_p_inoc_scaffold_28_curated_286
unknown

Not on your lists

356939..357043
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_287
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

357055..358239
DNA (1185bp) protein (395aa)
Putative uncharacterized protein id=1902971 bin=GWE2_Bacteroidetes_40_15 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein; K07133
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_28_curated_288
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

358250..359527
DNA (1278bp) protein (426aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KUC3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV04956.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
scnpilot_p_inoc_scaffold_28_curated_289
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

359524..361323
DNA (1800bp) protein (600aa)
Bipolar DNA helicase n=3 Tax=Dehalobacter RepID=K4KRT8_9FIRM
Bipolar DNA helicase
Uncharacterized protein {ECO:0000313|EMBL:AFV04955.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
scnpilot_p_inoc_scaffold_28_curated_290
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

361287..361541
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KUN5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV04954.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
scnpilot_p_inoc_scaffold_28_curated_291
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

361541..362584
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0W5M5_9FLAO
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_28_curated_292
unknown

Not on your lists

363371..363790
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_293
unknown

Not on your lists

363884..364147
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_294
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

364241..365740
DNA (1500bp) protein (500aa)
Similar to cobalt-zinc-cadmium resistance protein CzcB id=1768113 bin=GWE2_Bacteroidetes_40_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_28_curated_295
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

365753..368926
DNA (3174bp) protein (1058aa)
Cation efflux transporter id=4548954 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=unknown taxon_order=unknown taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
CzcA family heavy metal efflux pump
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_28_curated_296
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

368907..370085
DNA (1179bp) protein (393aa)
Uncharacterized protein id=4548955 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_28_curated_297
unknown

Not on your lists

370093..370536
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_298
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

370587..372458
DNA (1872bp) protein (624aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KGI4_9FIRM
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGL02323.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
scnpilot_p_inoc_scaffold_28_curated_299
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

372797..373258
DNA (462bp) protein (154aa)
membrane protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D54ACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54808.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_28_curated_300
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

373326..374171
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2J6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00097.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
regulatory protein RteC-like protein
Displaying items 271-300 of 338 in total

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