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scnpilot_p_inoc_scaffold_28_curated

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Displaying items 121-150 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_28_curated_121
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(150328..152196)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein id=2770625 bin=GWF2_Bacteroidetes_41_31 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_28_curated_122
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(152214..153704)
DNA (1491bp) protein (497aa)
Peptidase, M28 family id=4089643 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_28_curated_123
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(153712..154827)
DNA (1116bp) protein (372aa)
Sensor protein n=1 Tax=uncultured bacterium RepID=K1Y337_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_28_curated_124
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

154936..157227
DNA (2292bp) protein (764aa)
putative hybrid two-component system sensor histidine kinase and response regulator receiver (EC:2.7.13.3)
Probable hybrid two-component system sensor histidine kinase and response regulator receiver n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z2V2_FLABF
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_125
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

157371..158531
DNA (1161bp) protein (387aa)
senX3; signal-transduction histidine kinase SenX3 (EC:2.7.13.3)
Signal-transduction histidine kinase SenX3 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRF9_9CLOT
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_126
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158560..158934
DNA (375bp) protein (125aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R5L5_OWEHD
phoB; response regulator PhoB
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_127
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158954..160066
DNA (1113bp) protein (371aa)
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Bacterial sugar transferase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PXV1_9BACE
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_128
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

160080..160826
DNA (747bp) protein (249aa)
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_129
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

160823..162997
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DAP5_9PORP
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_130
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

163019..164473
DNA (1455bp) protein (485aa)
O-antigen polymerase id=3109302 bin=GWF2_Bacteroidetes_41_31 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
O-antigen polymerase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_131
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

164470..165810
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00036CE660
Uncharacterized protein {ECO:0000313|EMBL:KIF12361.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
membrane protein
scnpilot_p_inoc_scaffold_28_curated_132
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

165821..166975
DNA (1155bp) protein (385aa)
Glycosyl transferase group 1 id=1889987 bin=GWE2_Bacteroidetes_40_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
group 1 glycosyl transferase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_133
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

166972..167685
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000377E878
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_134
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

167682..168872
DNA (1191bp) protein (397aa)
Glycosyl transferase family 2 id=4018413 bin=GWF2_Bacteroidetes_49_14 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
family 2 glycosyl transferase
Tax=CG_Flavo_02
scnpilot_p_inoc_scaffold_28_curated_135
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

168884..169834
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BT55_9FLAO
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHQ02613.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
dNTP-hexose dehydratase-epimerase
scnpilot_p_inoc_scaffold_28_curated_136
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(169921..170472)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEH6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00424.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative lipoprotein
scnpilot_p_inoc_scaffold_28_curated_137
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(170477..172975)
DNA (2499bp) protein (833aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HFX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AHF13877.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
thiol protease/hemagglutinin PrtT
scnpilot_p_inoc_scaffold_28_curated_138
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173130..174779
DNA (1650bp) protein (550aa)
glycogen(starch) synthase (EC:2.4.1.11)
Glycogen(Starch) synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F3_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_139
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

174915..177476
DNA (2562bp) protein (854aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:ADQ78313.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ADQ78313.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F4_PALPW
scnpilot_p_inoc_scaffold_28_curated_140
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177526..178662)
DNA (1137bp) protein (379aa)
tRNA-guanine transglycosylase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T401_PALPW
scnpilot_p_inoc_scaffold_28_curated_141
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(178667..179254)
DNA (588bp) protein (196aa)
imidazole glycerol phosphate synthase subunit hish (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 1
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T402_PALPW
scnpilot_p_inoc_scaffold_28_curated_142
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(179251..179607)
DNA (357bp) protein (119aa)
aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Aspartate 1-decarboxylase n=3 Tax=Parabacteroides RepID=K5ZMX9_9PORP
scnpilot_p_inoc_scaffold_28_curated_143
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(179598..180443)
DNA (846bp) protein (282aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Pantothenate synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T404_PALPW
scnpilot_p_inoc_scaffold_28_curated_144
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

180570..181382
DNA (813bp) protein (271aa)
glycogen synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21]
Glycogen synthase (UDP-glucose) {ECO:0000313|EMBL:ADQ79449.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ADQ79449.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycogen synthase (UDP-glucose) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T405_PALPW
scnpilot_p_inoc_scaffold_28_curated_145
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

181492..182802
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T406_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79450.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_146
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


182902..184875
DNA (1974bp) protein (658aa)
SSU ribosomal protein S1P n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T141_PALPW
SSU ribosomal protein S1P {ECO:0000313|EMBL:ADQ78422.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SSU ribosomal protein s1p; K02945 small subunit ribosomal protein S1
scnpilot_p_inoc_scaffold_28_curated_147
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

185055..186659
DNA (1605bp) protein (535aa)
ctp synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8H2_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_148
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

186676..188637
DNA (1962bp) protein (654aa)
Membrane protein insertase YidC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8H1_PALPW
protein translocase subunit yidc; K03217 preprotein translocase subunit YidC
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_149
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188715..189731
DNA (1017bp) protein (339aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8G3_PALPW
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADQ81007.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_150
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

189739..190455
DNA (717bp) protein (239aa)
hypothetical protein AnHS1_05847 id=4474676 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=CG_Paludi_01
Displaying items 121-150 of 338 in total

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