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scnpilot_p_inoc_scaffold_28_curated

Search features with annotation key words

Displaying items 181-210 of 338 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_28_curated_181
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(233289..234155)
DNA (867bp) protein (289aa)
Peptidase M23 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8C3_PALPW
peptidase m23
Peptidase M23 {ECO:0000313|EMBL:ADQ80967.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_182
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(234293..234739)
DNA (447bp) protein (149aa)
H+transporting two-sector ATPase C subunit; K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14]
Uncharacterized protein n=2 Tax=Odoribacter RepID=R5VCA9_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_183
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(234785..236608)
DNA (1824bp) protein (608aa)
V-type ATP synthase subunit I; K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] rbh
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5USY3_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_184
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(236605..237213)
DNA (609bp) protein (203aa)
V-type ATP synthase subunit D (EC:3.6.3.14); K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14]
V-type ATPase, D subunit n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXA9_BACPM
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_185
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(237223..238539)
DNA (1317bp) protein (439aa)
V-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14]
ATP synthase alpha/beta family, nucleotide-binding domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PQK2_9BACE
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_186
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(238549..240303)
DNA (1755bp) protein (585aa)
V-type ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14]
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z897_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_187
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(240314..241144)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E910_9BACE
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_188
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(241160..241756)
DNA (597bp) protein (199aa)
putative ATP synthase, subunit E; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14]
ATP synthase subunit E n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JBW9_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_189
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

242335..243531
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J5_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_190
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

243607..245721
DNA (2115bp) protein (705aa)
ppic-type peptidyL-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J4_PALPW
scnpilot_p_inoc_scaffold_28_curated_191
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

245721..246749
DNA (1029bp) protein (343aa)
23S rRNA m(2)a-2503 methyltransferase (EC:2.1.1.-); K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J3_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_192
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(246774..248957)
DNA (2184bp) protein (728aa)
rela/spot family protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
RelA/SpoT family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H8_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_193
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

249181..249864
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NN56_9BACE
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_28_curated_194
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

249881..250609
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79623.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_195
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

250590..251138
DNA (549bp) protein (183aa)
Methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4I0_PALPW
methyltransferase
Methyltransferase {ECO:0000313|EMBL:ADQ79624.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_196
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251113..251658)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81172.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_197
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

252040..252780
DNA (741bp) protein (247aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R2_PALPW
had-superfamily hydrolase, subfamily ia, variant 3
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADQ81171.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_198
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

252777..253778
DNA (1002bp) protein (334aa)
Phosphate-selective porin O and P n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UVN7_9BACE
Phosphate-selective porin O and P.
Tax=CG_Bacteroid_01
scnpilot_p_inoc_scaffold_28_curated_199
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

253788..255095
DNA (1308bp) protein (436aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Histidinol dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R1_PALPW
scnpilot_p_inoc_scaffold_28_curated_200
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

255110..256141
DNA (1032bp) protein (344aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Histidinol-phosphate aminotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R0_PALPW
scnpilot_p_inoc_scaffold_28_curated_201
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(256187..257140)
DNA (954bp) protein (318aa)
methionyL-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Methionyl-tRNA formyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8F1_PALPW
scnpilot_p_inoc_scaffold_28_curated_202
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(257150..258331)
DNA (1182bp) protein (394aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0P0_PALPW
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ81104.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_203
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(258418..259344)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T483_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79527.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_204
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259364..259663)
DNA (300bp) protein (100aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K5_PALPW
stress responsive alpha-beta barrel domaiN-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:ADQ81049.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_205
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259665..260018)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81050.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_206
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(260022..261599)
DNA (1578bp) protein (526aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L-aspartate oxidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K7_PALPW
scnpilot_p_inoc_scaffold_28_curated_207
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(261614..262738)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8K8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81052.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_28_curated_208
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(262790..265264)
DNA (2475bp) protein (825aa)
Ferrous iron transport protein B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4G7_PALPW
Ferrous iron transport protein B {ECO:0000313|EMBL:ADQ79611.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
ferrous iron transport protein b; K04759 ferrous iron transport protein B
scnpilot_p_inoc_scaffold_28_curated_209
unknown

Not on your lists

265753..266463
DNA (711bp) protein (237aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_28_curated_210
unknown

Not on your lists

266653..267120
DNA (468bp) protein (156aa)

This feature has no annotations

Displaying items 181-210 of 338 in total

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