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scnpilot_p_inoc_scaffold_320_curated

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_320_curated_31
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53049..54311
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6EAJ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA93591.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
scnpilot_p_inoc_scaffold_320_curated_32
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54343..55665
DNA (1323bp) protein (441aa)
Gluconate transporter id=1847236 bin=GWD2_Bacteroidales_45_23 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
gluconate transporter
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_320_curated_33
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55669..56994
DNA (1326bp) protein (442aa)
glycerate kinase; K00050 hydroxypyruvate reductase [EC:1.1.1.81]
Hydroxypyruvate reductase id=4755712 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_320_curated_34
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57007..58482
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EN12_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94065.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_35
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

58618..60033
DNA (1416bp) protein (472aa)
Oxidoreductase domain protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RTA1_9BACE
Oxidoreductase domain protein {ECO:0000313|EMBL:CCZ44475.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_320_curated_36
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60039..61049
DNA (1011bp) protein (337aa)
Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Bacteroidales RepID=K0WRP9_9PORP
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:EJZ61987.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
scnpilot_p_inoc_scaffold_320_curated_37
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

61202..63661
DNA (2460bp) protein (820aa)
type I restriction-modification system specificity subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction-modification system, M subunit n=2 Tax=root RepID=K0WZY3_9PORP
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EJZ64753.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
scnpilot_p_inoc_scaffold_320_curated_38
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63665..64876
DNA (1212bp) protein (404aa)
type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JA78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEN82923.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;"
scnpilot_p_inoc_scaffold_320_curated_39
unknown

Not on your lists

64902..65753
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XFL7_CALS8
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_40
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65757..66686
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5RS99_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK15006.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
scnpilot_p_inoc_scaffold_320_curated_41
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66704..68464
DNA (1761bp) protein (587aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6UWU4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC90338.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_42
bacterium UASB270, Bacteria

Not on your lists

68636..70015
DNA (1380bp) protein (460aa)
Genome sequencing data, contig C326 n=1 Tax=Microcystis aeruginosa PCC 9701 RepID=I4IQP0_MICAE
Uncharacterized protein {ECO:0000313|EMBL:GAK61471.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_43
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70019..70687
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DLE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA85729.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_44
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

70711..71694
DNA (984bp) protein (328aa)
Filamentation induced by cAMP protein Fic id=4312068 bin=GWF2_Lentisphaerae_38_69 species=Methanocorpusculum labreanum genus=Methanocorpusculum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hypothetical protein
Tax=GWF2_Lentisphaerae_38_69_curated
scnpilot_p_inoc_scaffold_320_curated_45
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

71707..72705
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L2W9_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49649.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_320_curated_46
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72730..73224
DNA (495bp) protein (165aa)
Type I restriction-modification system, subunit R {ECO:0000313|EMBL:CDN31780.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CDN31780.1};; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLQ2_9PORP
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_47
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73225..75849
DNA (2625bp) protein (875aa)
putative type I restriction-modification enzyme subunit R (EC:3.1.21.3)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLQ2_9PORP
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EJZ64755.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
scnpilot_p_inoc_scaffold_320_curated_48
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

75849..76544
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EZ35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96504.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_49
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

76622..79525
DNA (2904bp) protein (968aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
Glycosyl hydrolase family 2, TIM barrel domain protein n=1 Tax=Prevotella sp. MSX73 RepID=J4TZK9_9BACT
beta-galactosidase/beta-glucuronidase
scnpilot_p_inoc_scaffold_320_curated_50
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

79533..82835
DNA (3303bp) protein (1101aa)
Glycoside hydrolase family 2 n=1 Tax=Bacteroides thetaiotaomicron CAG:40 PF3_9BACE">RepID=R7KPF3_9BACE
Glycoside hydrolase family 2 {ECO:0000313|EMBL:CDE76832.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
Glycosyl hydrolases family 2, sugar binding domain.
scnpilot_p_inoc_scaffold_320_curated_51
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82893..83774)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37598.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_52
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83853..84905)
DNA (1053bp) protein (351aa)
amp-dependent synthetase and ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26]
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N1_PALPW
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ79675.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_320_curated_53
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84964..86034)
DNA (1071bp) protein (357aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N2_PALPW
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADQ79676.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_320_curated_54
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(86036..86950)
DNA (915bp) protein (305aa)
1,4-dihydroxy-2-naphthoateoctaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
1,4-dihydroxy-2-naphthoateoctaprenyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N3_PALPW
scnpilot_p_inoc_scaffold_320_curated_55
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(87024..87839)
DNA (816bp) protein (272aa)
1,4-dihydroxy-2-naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36]
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
1,4-Dihydroxy-2-naphthoate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N4_PALPW
scnpilot_p_inoc_scaffold_320_curated_56
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(87841..89652)
DNA (1812bp) protein (604aa)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; K02551 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 1736
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N5_PALPW
scnpilot_p_inoc_scaffold_320_curated_57
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89689..90813)
DNA (1125bp) protein (375aa)
isochorismate synthase; K02361 isochorismate synthase [EC:5.4.4.2]
Isochorismate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N6_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_320_curated_58
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90814..91224)
DNA (411bp) protein (137aa)
Thioesterase superfamily protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4N7_PALPW
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADQ79681.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_320_curated_59
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(91237..92253)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XPI3_LEEBM
Glycosyl hydrolase family protein {ECO:0000313|EMBL:AHM60055.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
putative beta-xylosidase
scnpilot_p_inoc_scaffold_320_curated_60
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92353..92874)
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI10_CHIPD
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIX22365.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
N-acetyltransferase GCN5
Displaying items 31-60 of 70 in total

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