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scnpilot_p_inoc_scaffold_320_curated

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_320_curated_1
unknown

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1..222
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_320_curated_2
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

227..1585
DNA (1359bp) protein (453aa)
hypothetical protein id=2477968 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_320_curated_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1989..4718
DNA (2730bp) protein (910aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9G2T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY40639.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_320_curated_4
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4727..9076
DNA (4350bp) protein (1450aa)
Uncharacterized protein n=2 Tax=Bacteroides finegoldii RepID=K5CF93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92179.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
beta-galactosidase rbh
scnpilot_p_inoc_scaffold_320_curated_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9127..11811
DNA (2685bp) protein (895aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI000368B686
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_p_inoc_scaffold_320_curated_6
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11840..15247
DNA (3408bp) protein (1136aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
beta-galactosidase; K01190 beta-galactosidase [EC:3.2.1.23] rbh
Beta-galactosidase (Lactase) n=1 Tax=Bacteroides faecis CAG:32 RepID=R6W5Q9_9BACE
scnpilot_p_inoc_scaffold_320_curated_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15261..16160
DNA (900bp) protein (300aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
Dihydrodipicolinate synthase n=4 Tax=Bacteroides RepID=Q8A3Z0_BACTN
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EOR99331.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
scnpilot_p_inoc_scaffold_320_curated_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16264..17745
DNA (1482bp) protein (494aa)
Sodium symporter family protein n=2 Tax=Bacteroides RepID=E5WWH9_9BACE
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:KKB49957.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
sodium-dependent multivitamin transporter; K03307 solute:Na+ symporter, SSS family rbh
scnpilot_p_inoc_scaffold_320_curated_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17837..18418
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B9S2_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS15901.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
scnpilot_p_inoc_scaffold_320_curated_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18491..19525
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BE51_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56274.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Fe2+-dicitrate sensor, membrane component
scnpilot_p_inoc_scaffold_320_curated_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19784..23209
DNA (3426bp) protein (1142aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XF57_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EJZ66509.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
frrG; putative outer membrane protein
scnpilot_p_inoc_scaffold_320_curated_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23224..24729
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XRP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66510.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_13
unknown

Not on your lists

24787..25866
DNA (1080bp) protein (360aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_320_curated_14
unknown

Not on your lists

25933..27954
DNA (2022bp) protein (674aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_320_curated_15
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27954..29759
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I996_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM48593.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_16
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29761..30702
DNA (942bp) protein (314aa)
Esterase/lipase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5G2_9FLAO
Beta-galactosidase {ECO:0000313|EMBL:KDN54224.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_17
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30739..35487
DNA (4749bp) protein (1583aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI000363A596
Uncharacterized protein {ECO:0000313|EMBL:KKB46696.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
glycoside hydrolase
scnpilot_p_inoc_scaffold_320_curated_18
unknown

Not on your lists

35540..35656
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_320_curated_19
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35668..36954)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029ADC85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV32348.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_p_inoc_scaffold_320_curated_20
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37009..39426)
DNA (2418bp) protein (806aa)
Outer membrane receptor protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7J6_OWEHD
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AEV32349.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_p_inoc_scaffold_320_curated_21
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39634..41205
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030B1467
Ankyrin repeat-containing protein {ECO:0000313|EMBL:KDN54305.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
ankyrin
scnpilot_p_inoc_scaffold_320_curated_22
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41207..41674
DNA (468bp) protein (156aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K4G4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AJW64428.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
hypothetical protein
scnpilot_p_inoc_scaffold_320_curated_23
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41913..43511
DNA (1599bp) protein (533aa)
flavodoxin/nitric oxide synthase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Flavodoxin/nitric oxide synthase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPT2_ELIME
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CDS93218.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
scnpilot_p_inoc_scaffold_320_curated_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43773..44354
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides RepID=E1YX49_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN24072.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
RNA polymerase ECF-type sigma factor
scnpilot_p_inoc_scaffold_320_curated_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44478..45485
DNA (1008bp) protein (336aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=E1YX48_9PORP
FecR family protein {ECO:0000313|EMBL:KDS49604.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
anti-sigma factor
scnpilot_p_inoc_scaffold_320_curated_26
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45510..48875
DNA (3366bp) protein (1122aa)
TonB-dependent receptor n=1 Tax=Bacteroides sp. CAG:709 RepID=R6EUG6_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:CDA93582.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_320_curated_27
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48894..50579
DNA (1686bp) protein (562aa)
RagB/SusD domain-containing protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6DYN5_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:CDA93583.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_320_curated_28
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50724..51437
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6E8M6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA93584.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
Metal-dependent hydrolase
scnpilot_p_inoc_scaffold_320_curated_29
unknown

Not on your lists

51450..52226
DNA (777bp) protein (259aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_320_curated_30
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52238..53011
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZ97_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01222.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
metal-dependent hydrolase
Displaying items 1-30 of 70 in total

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