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scnpilot_p_inoc_scaffold_1871_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1871_curated_1
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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204..2744
DNA (2541bp) protein (847aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33260.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
scnpilot_p_inoc_scaffold_1871_curated_2
unknown

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3051..3797
DNA (747bp) protein (249aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1871_curated_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4119..5279)
DNA (1161bp) protein (387aa)
Transposase id=3840733 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
transposase
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_1871_curated_4
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5279..6181)
DNA (903bp) protein (301aa)
Putative integrase/recombinase y4qK n=1 Tax=Bacteroidales bacterium CF RepID=U5Q820_9BACT
hypothetical protein
Putative integrase/recombinase y4qK {ECO:0000313|EMBL:AGY54598.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_1871_curated_5
unknown

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comp(6391..6492)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1871_curated_6
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6510..7022
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=4927550 bin=GWC2_Bacteroidetes_46_850 species=Tetragenococcus halophilus genus=Tetragenococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Uncharacterized protein {ECO:0000313|EMBL:KGN81700.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1871_curated_7
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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7091..7906
DNA (816bp) protein (272aa)
Putative uncharacterized protein id=4927551 bin=GWC2_Bacteroidetes_46_850 species=Capnocytophaga gingivalis genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
DNA-binding protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_1871_curated_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8074..9087
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENP5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50621.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_1871_curated_9
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9115..9417
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3BUJ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD97812.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
scnpilot_p_inoc_scaffold_1871_curated_10
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9630..10403
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SKQ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ47281.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1871_curated_11
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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10586..10963
DNA (378bp) protein (126aa)
id=3827876 bin=GWF2_Bacteroidetes_29_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_1871_curated_12
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10970..11185)
DNA (216bp) protein (72aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J2JSG6_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EJL63948.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
ydcN; transcriptional regulator
scnpilot_p_inoc_scaffold_1871_curated_13
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11282..11476
DNA (195bp) protein (65aa)
HSP20-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BGB6_ZUNPS
HSP20-like protein
HSP20-like protein {ECO:0000313|EMBL:ADF51075.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_1871_curated_14
unknown

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11492..11662
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1871_curated_15
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11743..13077
DNA (1335bp) protein (445aa)
Abortive infection protein, putative n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0R8_EMTOG
abortive infection protein, putative
Abortive infection protein, putative {ECO:0000313|EMBL:AFK05521.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_1871_curated_16
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13058..13759
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0R7_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK05520.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_1871_curated_17
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13935..14366
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036223E1
Putative lipoprotein {ECO:0000313|EMBL:ERF59826.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1871_curated_18
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14664..15701
DNA (1038bp) protein (346aa)
hypothetical protein FbacHQ_14909 id=1845204 bin=GWD2_Bacteroidetes_33_33 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_p_inoc_scaffold_1871_curated_19
unknown

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15731..15886
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 19 items

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