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scnpilot_p_inoc_scaffold_37_curated

Search features with annotation key words

Displaying items 1-30 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_37_curated_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_2
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148..1212)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) PF1_TANFA">RepID=G8UPF1_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR51533.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(1303..3915)
DNA (2613bp) protein (871aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_37_curated_4
unknown

Not on your lists

comp(3927..4826)
DNA (900bp) protein (300aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4837..6072)
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UP51_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW21092.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
scnpilot_p_inoc_scaffold_37_curated_6
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6941..9262)
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CRW7_9BACE
Alfa-L-rhamnosidase {ECO:0000313|EMBL:GAE84608.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
Bacterial alpha-L-rhamnosidase.
scnpilot_p_inoc_scaffold_37_curated_7
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9326..10903)
DNA (1578bp) protein (526aa)
SSS sodium solute transporter n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FZ79_ECHVK
Sodium/glucose cotransporter {ECO:0000313|EMBL:KHJ39310.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SSS sodium solute transporter
scnpilot_p_inoc_scaffold_37_curated_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10920..11993)
DNA (1074bp) protein (358aa)
Oxidoreductase domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBP5_PEDSD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADY52736.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_37_curated_9
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12027..14483)
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D536_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD84642.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_10
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14496..16538)
DNA (2043bp) protein (681aa)
Six-hairpin glycosidase n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D2R4_9BACE
Six-hairpin glycosidase {ECO:0000313|EMBL:CDD84640.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
hypothetical protein; K09955 hypothetical protein rbh
scnpilot_p_inoc_scaffold_37_curated_11
unknown

Not on your lists

comp(16660..18270)
DNA (1611bp) protein (537aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18587..18841
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=1 Tax=Butyricimonas synergistica RepID=UPI00037DBBFC
SSU ribosomal protein s20p; K02968 small subunit ribosomal protein S20
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18894..19514)
DNA (621bp) protein (207aa)
YceI family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R2_PALPW
ycei family protein
YceI family protein {ECO:0000313|EMBL:ADQ80756.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_14
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(19586..20926)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein id=4089762 bin=GWF2_Bacteroidetes_39_10 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_p_inoc_scaffold_37_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20953..21543)
DNA (591bp) protein (197aa)
YceI family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R4_PALPW
ycei family protein
YceI family protein {ECO:0000313|EMBL:ADQ80758.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_16
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(21683..22129)
DNA (447bp) protein (149aa)
Transcriptional regulator, BadM/Rrf2 family id=2046470 bin=GWE2_Bacteroidetes_40_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
transcriptional regulator, badm/rrf2 family
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_37_curated_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22279..25128)
DNA (2850bp) protein (950aa)
DNA polymerase i (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I9_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25294..26271
DNA (978bp) protein (326aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
Polyprenyl synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I8_PALPW
Polyprenyl synthetase {ECO:0000313|EMBL:ADQ80332.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26279..27157)
DNA (879bp) protein (293aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Deoxyribose-phosphate aldolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I7_PALPW
scnpilot_p_inoc_scaffold_37_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27168..27836)
DNA (669bp) protein (223aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I5_PALPW
scnpilot_p_inoc_scaffold_37_curated_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27910..29337
DNA (1428bp) protein (476aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Adenylosuccinate lyase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I4_PALPW
scnpilot_p_inoc_scaffold_37_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29418..31253
DNA (1836bp) protein (612aa)
ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I3_PALPW
ABC transporter related protein {ECO:0000313|EMBL:ADQ80327.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_23
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31337..32926
DNA (1590bp) protein (530aa)
alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB53938.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
scnpilot_p_inoc_scaffold_37_curated_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33136..34428
DNA (1293bp) protein (431aa)
tyrosyl-tRNA synthetase 1; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=2 Tax=Parabacteroides RepID=N2AXQ9_9PORP
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_25
unknown

Not on your lists

34986..35123
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_26

Not on your lists

35199..35582
DNA (384bp) protein (128aa)
Two-component system response regulator n=1 Tax=gut metagenome RepID=J9BYG5_9ZZZZ
Two-component system response regulator {ECO:0000313|EMBL:EJW92590.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
scnpilot_p_inoc_scaffold_37_curated_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35809..38835
DNA (3027bp) protein (1009aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CL03T12C37 RepID=I8ZG06_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73912.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
scnpilot_p_inoc_scaffold_37_curated_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39234..40577)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A2C1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB56958.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_29
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40613..42463)
DNA (1851bp) protein (617aa)
SusD family protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PW06_9BACE
SusD family protein {ECO:0000313|EMBL:EGF52584.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_30
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42506..45871)
DNA (3366bp) protein (1122aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PW07_9BACE
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EGF52585.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
Displaying items 1-30 of 272 in total

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