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scnpilot_p_inoc_scaffold_37_curated

Search features with annotation key words

Displaying items 151-180 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_37_curated_151
unknown

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206785..208068
DNA (1284bp) protein (428aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_152
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(208127..210541)
DNA (2415bp) protein (805aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5J1L7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY48225.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
scnpilot_p_inoc_scaffold_37_curated_153
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(210549..211463)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RV12_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59892.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
scnpilot_p_inoc_scaffold_37_curated_154
Prevotella saccharolytica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(211470..213956)
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Prevotella saccharolytica F0055 RepID=L1NK40_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKY03635.1}; TaxID=1127699 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella saccharolytica F0055.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_155
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(214072..216609)
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9H256_9BACE
cell wall/surface repeat protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_156
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(216660..219281)
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J672_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE58392.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_157
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(219294..220979)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XTY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53532.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
scnpilot_p_inoc_scaffold_37_curated_158
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(220999..221880)
DNA (882bp) protein (294aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TEL9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY67626.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
scnpilot_p_inoc_scaffold_37_curated_159
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(221902..223677)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8YYE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY48215.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_160
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(223714..226872)
DNA (3159bp) protein (1053aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMA0_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDE40764.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_161
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(227029..228549)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78998.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_162
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(228567..231485)
DNA (2919bp) protein (973aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IRC4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY39417.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
FAD-binding oxidoreductase
scnpilot_p_inoc_scaffold_37_curated_163
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(231486..232712)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XTV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53512.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_164
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(232804..233979)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01039.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_165
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(233988..234803)
DNA (816bp) protein (272aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;"
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X0X7_9PORP
scnpilot_p_inoc_scaffold_37_curated_166
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(234814..235749)
DNA (936bp) protein (312aa)
Diacylglycerol kinase catalytic region n=1 Tax=gut metagenome RepID=J9FB34_9ZZZZ
diacylglycerol kinase catalytic region; K07029
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_37_curated_167
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(235760..236833)
DNA (1074bp) protein (358aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8R9_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_168
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(236925..237506)
DNA (582bp) protein (194aa)
peptidylprolyl isomerase fkbp-type; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8S0_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_169
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(237567..240380)
DNA (2814bp) protein (938aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8S1_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_170
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

240545..241738
DNA (1194bp) protein (398aa)
N-acetylmuramoyl-L-alanine amidase amiA; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase, family 3 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWK5_9BACE
N-acetylmuramoyl-L-alanine amidase, family 3 {ECO:0000313|EMBL:EFI07008.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
scnpilot_p_inoc_scaffold_37_curated_171
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

241751..242704
DNA (954bp) protein (318aa)
Mammalian cell entry related domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8S3_PALPW
mammalian cell entry related domain protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ADQ81182.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_172
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

243114..244514
DNA (1401bp) protein (467aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A9_PALPW
chromosomal replication initiator protein dnaa; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_173
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

244561..245115
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0B0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78164.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_174
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

245099..245995
DNA (897bp) protein (299aa)
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA dimethylallyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0B1_PALPW
scnpilot_p_inoc_scaffold_37_curated_175
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

246014..246937
DNA (924bp) protein (308aa)
RNAse z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11]
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribonuclease Z n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T178_PALPW
scnpilot_p_inoc_scaffold_37_curated_176
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

247006..249750
DNA (2745bp) protein (915aa)
Alpha amylase catalytic region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M9_PALPW
Alpha amylase catalytic region {ECO:0000313|EMBL:ADQ81138.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
alpha amylase
scnpilot_p_inoc_scaffold_37_curated_177
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(249807..251429)
DNA (1623bp) protein (541aa)
c-terminal processing peptidase-3; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
C-terminal processing peptidase-3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M8_PALPW
C-terminal processing peptidase-3 {ECO:0000313|EMBL:ADQ81137.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_178
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251490..251915)
DNA (426bp) protein (142aa)
cmp/dcmp deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12]
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M7_PALPW
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:ADQ81136.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_179
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(251926..252864)
DNA (939bp) protein (313aa)
mur ligase middle domain protein; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-]
Mur ligase middle domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M6_PALPW
Mur ligase middle domain protein {ECO:0000313|EMBL:ADQ81135.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_180
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

252945..253787
DNA (843bp) protein (281aa)
Putative metal-dependent hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8M5_PALPW
metaL-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ADQ81134.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 151-180 of 272 in total

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