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scnpilot_p_inoc_scaffold_898_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_898_curated_1
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

606..983
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:AIZ42455.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
scnpilot_p_inoc_scaffold_898_curated_2
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1639..3552
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RWR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59848.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
cell wall-associated protein
scnpilot_p_inoc_scaffold_898_curated_3
unknown

Not on your lists

3564..3680
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_898_curated_4
unknown

Not on your lists

3712..4212
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_898_curated_5
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4773..5009
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6R9U8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53399.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
scnpilot_p_inoc_scaffold_898_curated_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5160..5624)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=2589823 bin=GWF2_Bacteroidetes_33_38 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein; K07133
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_p_inoc_scaffold_898_curated_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(5717..6304)
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=3486100 bin=GWF2_Bacteroidetes_40_13 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein; K07133
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_898_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7242..8414)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79620.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8463..9062)
DNA (600bp) protein (200aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ADQ79621.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ADQ79621.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Riboflavin synthase, alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4H7_PALPW
scnpilot_p_inoc_scaffold_898_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9089..10402)
DNA (1314bp) protein (438aa)
L-threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
L-threonine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T837_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_898_curated_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10415..11626)
DNA (1212bp) protein (404aa)
phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T836_PALPW
Phosphoglycerate mutase {ECO:0000313|EMBL:ADQ80880.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11643..12701)
DNA (1059bp) protein (353aa)
Phosphoesterase RecJ domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T835_PALPW
phosphoesterase recj domain protein; K06881 phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ADQ80879.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12733..14844)
DNA (2112bp) protein (704aa)
ComEC/Rec2-related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T834_PALPW
comec/rec2-related protein; K02238 competence protein ComEC
ComEC/Rec2-related protein {ECO:0000313|EMBL:ADQ80878.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_14
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14881..15531)
DNA (651bp) protein (217aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T833_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_898_curated_15
unknown

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comp(15603..15761)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_898_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15849..16442)
DNA (594bp) protein (198aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T831_PALPW
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ADQ80875.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16577..17752)
DNA (1176bp) protein (392aa)
sam-dependent methyltransferase (EC:2.1.1.-); K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM-dependent methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T830_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_898_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17724..18389)
DNA (666bp) protein (222aa)
3'-5' exonuclease n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T829_PALPW
3'-5' exonuclease
3'-5' exonuclease {ECO:0000313|EMBL:ADQ80873.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18391..19026)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T828_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80872.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19089..19391
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T827_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80871.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_21
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19381..19809)
DNA (429bp) protein (143aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EDY97477.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EDY97477.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU99_BACPM
scnpilot_p_inoc_scaffold_898_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19806..21695)
DNA (1890bp) protein (630aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7M8_PALPW
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
ABC transporter related protein {ECO:0000313|EMBL:ADQ80722.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_23
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21911..22486
DNA (576bp) protein (192aa)
Rubrerythrin n=1 Tax=Tannerella sp. CAG:118 RepID=R5I583_9PORP
Rubrerythrin {ECO:0000313|EMBL:CCY37135.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
Rubrerythrin
scnpilot_p_inoc_scaffold_898_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22671..23375
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7N1_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80725.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_898_curated_25
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23370..23681)
DNA (312bp) protein (104aa)
Monovalent cation/H+ antiporter subunit G n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WX21_9BACI
Monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:ENH97601.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
monovalent cation/proton antiporter subunit MnhG/PhaG; K05571 multicomponent Na+:H+ antiporter subunit G
scnpilot_p_inoc_scaffold_898_curated_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(23674..23955)
DNA (282bp) protein (94aa)
Multiple resistance and pH regulation protein F n=1 Tax=Alcanivorax sp. DG881 RepID=B4X2V5_9GAMM
mnhF; multisubunit Na+/H+ antiporter subunit MnhF; K05563 multicomponent K+:H+ antiporter subunit F
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_898_curated_27
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23952..24278)
DNA (327bp) protein (109aa)
cation:proton antiporter n=1 Tax=Thioalkalivibrio RepID=UPI00037655B8
cation antiporter; K05569 multicomponent Na+:H+ antiporter subunit E
Cation antiporter {ECO:0000313|EMBL:ADC71267.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
scnpilot_p_inoc_scaffold_898_curated_28
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(24275..25765)
DNA (1491bp) protein (497aa)
Na(+) H(+) antiporter subunit D n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JSV7_9BACT
Na(+) H(+) antiporter subunit D
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_898_curated_29
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25762..26112)
DNA (351bp) protein (117aa)
Na(+) H(+) antiporter subunit C n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQG0_9BACT
Na(+) H(+) antiporter subunit C {ECO:0000313|EMBL:GAO31322.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
mrpC; Na(+)/H(+) antiporter subunit C
scnpilot_p_inoc_scaffold_898_curated_30
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(26112..26528)
DNA (417bp) protein (139aa)
Putative monovalent cation/H+ antiporter subunit B n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEY3_MYXFH
putative monovalent cation/H+ antiporter subunit B; K05566 multicomponent Na+:H+ antiporter subunit B
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying items 1-30 of 38 in total

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