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scnpilot_p_inoc_scaffold_465_curated

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_465_curated_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(316..1524)
DNA (1209bp) protein (403aa)
Glycosyl transferase id=3109298 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
glycosyl transferase family protein
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_465_curated_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(1549..2481)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX79_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_465_curated_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2565..3773)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHP5_SPILD
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_4
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3935..4957
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F6138E
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AFL79622.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_p_inoc_scaffold_465_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5017..6723)
DNA (1707bp) protein (569aa)
acyL-CoA dehydrogenase domaiN-containing protein; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T553_PALPW
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADQ79847.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6725..7744)
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T552_PALPW
electron transfer flavoprotein alpha subunit; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADQ79846.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7750..8613)
DNA (864bp) protein (288aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T551_PALPW
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADQ79845.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9109..10083
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZGZ1_9PORP
peptidase, M28 family
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10088..11170
DNA (1083bp) protein (361aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T549_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11172..12410
DNA (1239bp) protein (413aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Gamma-glutamyl phosphate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T548_PALPW
scnpilot_p_inoc_scaffold_465_curated_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12619..12861
DNA (243bp) protein (81aa)
RNP-1 like RNA-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T547_PALPW
rnp-1 like RNA-binding protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12961..13845
DNA (885bp) protein (295aa)
Abortive infection protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T546_PALPW
abortive infection protein; K07052
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13849..14238)
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TK11_9BACE
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14326..17091
DNA (2766bp) protein (922aa)
TPR domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T545_PALPW
tpr domaiN-containing protein
TPR domain-containing protein {ECO:0000313|EMBL:ADQ79839.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17098..18645
DNA (1548bp) protein (516aa)
Response regulator receiver protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T544_PALPW
response regulator receiver protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18661..19617
DNA (957bp) protein (319aa)
N-acetylornithine carbamoyltransferase (EC:2.1.3.9); K13043 N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:ADQ79837.1}; EC=2.1.3.9 {ECO:0000313|EMBL:ADQ79837.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
N-acetylornithine carbamoyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T543_PALPW
scnpilot_p_inoc_scaffold_465_curated_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19641..20165
DNA (525bp) protein (175aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T542_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20166..20942
DNA (777bp) protein (259aa)
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Acetylglutamate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T541_PALPW
scnpilot_p_inoc_scaffold_465_curated_19
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20960..22315
DNA (1356bp) protein (452aa)
Putative two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCT1_CHIPD
Regulator {ECO:0000313|EMBL:KIF30117.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_465_curated_20
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

22318..25140
DNA (2823bp) protein (941aa)
Multi-sensor hybrid histidine kinase id=1920909 bin=GWE2_Bacteroidetes_40_15 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
putative multi-sensor hybrid histidine kinase
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_465_curated_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25167..26033
DNA (867bp) protein (289aa)
Putative xylanase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T536_PALPW
xylanase
Putative xylanase {ECO:0000313|EMBL:ADQ79830.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26040..27101
DNA (1062bp) protein (354aa)
peptidase m20; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Peptidase M20 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T535_PALPW
Peptidase M20 {ECO:0000313|EMBL:ADQ79829.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27102..29972)
DNA (2871bp) protein (957aa)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLF7_SOLCM
DNA/RNA helicase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29984..30931)
DNA (948bp) protein (316aa)
kpsf/gutq family protein (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
KpsF/GutQ family protein {ECO:0000313|EMBL:ADQ79827.1}; EC=5.3.1.13 {ECO:0000313|EMBL:ADQ79827.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
KpsF/GutQ family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T533_PALPW
scnpilot_p_inoc_scaffold_465_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30928..32289)
DNA (1362bp) protein (454aa)
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T532_PALPW
scnpilot_p_inoc_scaffold_465_curated_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32286..33230)
DNA (945bp) protein (315aa)
Glycoside hydrolase family 16 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T531_PALPW
glycoside hydrolase family protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33239..35197)
DNA (1959bp) protein (653aa)
DNA gyrase subunit b (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T529_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_465_curated_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35360..36307
DNA (948bp) protein (316aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Methylenetetrahydrofolate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T515_PALPW
scnpilot_p_inoc_scaffold_465_curated_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36403..36780
DNA (378bp) protein (126aa)
DnaK suppressor protein, putative n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T521_PALPW
dnak suppressor protein, putative
DnaK suppressor protein, putative {ECO:0000313|EMBL:ADQ79815.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_465_curated_30
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36861..37469
DNA (609bp) protein (203aa)
signal peptidase ii (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T520_PALPW
Tax=CG_Paludi_01
Displaying items 1-30 of 115 in total

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