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scnpilot_p_inoc_scaffold_29_curated

Search features with annotation key words

Displaying items 151-180 of 330 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_29_curated_151
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(211249..213309)
DNA (2061bp) protein (687aa)
TonB-dependent outer membrane receptor id=4009933 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_29_curated_152
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(213314..214723)
DNA (1410bp) protein (470aa)
hypothetical protein MsalJ2_00205 id=1810359 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
glucose sorbosone dehydrogenase
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_29_curated_153
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214930..216321
DNA (1392bp) protein (464aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T4_PALPW
dead/deah box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADQ78209.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_154
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(216327..217145)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4R9_SPHS2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_p_inoc_scaffold_29_curated_155
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(217145..219460)
DNA (2316bp) protein (772aa)
TonB-dependent receptor id=2995276 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
tonb-dependent receptor
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_156
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

219676..220086
DNA (411bp) protein (137aa)
methylmalonyL-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Methylmalonyl-CoA epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1G0_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_157
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

220105..221664
DNA (1560bp) protein (520aa)
carboxyl transferase (EC:6.4.1.3)
Carboxyl transferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F9_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_158
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221667..222032
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A70C6
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_159
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

222040..222489
DNA (450bp) protein (150aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F7_PALPW
biotin/lipoyl attachment domaiN-containing protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_160
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

222492..223721
DNA (1230bp) protein (410aa)
oadB; oxaloacetate decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3]
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Alistipes sp. CAG:831 RepID=R5ICA8_9BACT
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_161
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

223873..226041
DNA (2169bp) protein (723aa)
HRDC domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T239_PALPW
hrdc domain protein
HRDC domain protein {ECO:0000313|EMBL:ADQ78783.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_162
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(226038..227063)
DNA (1026bp) protein (342aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T221_PALPW
family 2 glycosyl transferase; K07011
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ78765.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_163
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(227060..227938)
DNA (879bp) protein (293aa)
lipid a biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipid A biosynthesis acyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T220_PALPW
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ADQ78764.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_164
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(227960..228283)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T219_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78763.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_165
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

228485..229243
DNA (759bp) protein (253aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
Dihydrodipicolinate reductase id=2047094 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_29_curated_166
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

229236..229874
DNA (639bp) protein (213aa)
Putative metallo-beta-lactamase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T297_PALPW
metallO-beta-lactamase
Putative metallo-beta-lactamase {ECO:0000313|EMBL:ADQ78841.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_167
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(229878..230456)
DNA (579bp) protein (193aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 173
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T296_PALPW
scnpilot_p_inoc_scaffold_29_curated_168
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

230560..231789
DNA (1230bp) protein (410aa)
peptidase t (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4]
Peptidase T n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T227_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_169
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

231794..232864
DNA (1071bp) protein (357aa)
aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aminomethyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T226_PALPW
scnpilot_p_inoc_scaffold_29_curated_170
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(232988..235288)
DNA (2301bp) protein (767aa)
allosteric nADP-dependent malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Allosteric NADP-dependent malic enzyme n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T225_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_171
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

235387..236478
DNA (1092bp) protein (364aa)
DNA replication and repair protein RecF n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T223_PALPW
DNA replication and repair protein recf; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_172
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

236763..239306
DNA (2544bp) protein (848aa)
ribonucleoside-diphosphate reductase, adenosylcobalamiN-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADQ78766.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADQ78766.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T222_PALPW
scnpilot_p_inoc_scaffold_29_curated_173
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

239341..240840
DNA (1500bp) protein (500aa)
Amino acid carrier protein id=4044156 bin=GWC2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_29_curated_174
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(241371..241886)
DNA (516bp) protein (172aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M2_PALPW
scnpilot_p_inoc_scaffold_29_curated_175
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(241893..242567)
DNA (675bp) protein (225aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2M3_PALPW
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADQ78967.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_176
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(243320..244078)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8G1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92356.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
scnpilot_p_inoc_scaffold_29_curated_177
unknown

Not on your lists

comp(244340..244444)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_29_curated_178
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

244503..244928
DNA (426bp) protein (142aa)
holliday junction resolvase yqgf; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Putative Holliday junction resolvase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T253_PALPW
scnpilot_p_inoc_scaffold_29_curated_179
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

244925..245476
DNA (552bp) protein (184aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptide deformylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T252_PALPW
scnpilot_p_inoc_scaffold_29_curated_180
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(245497..247188)
DNA (1692bp) protein (564aa)
Alpha amylase catalytic region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2W9_PALPW
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ADQ79063.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 151-180 of 330 in total

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