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scnpilot_p_inoc_scaffold_29_curated

Search features with annotation key words

Displaying items 181-210 of 330 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_29_curated_181
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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247289..247777
DNA (489bp) protein (163aa)
thiol peroxidase (atypical 2-cys peroxiredoxin) (EC:1.11.1.5); K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]
Probable thiol peroxidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2X1_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_182
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(247863..249191)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E3_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_183
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

249318..250898
DNA (1581bp) protein (527aa)
Peptidoglycan-binding lysin domain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E2_PALPW
peptidoglycaN-binding lysin domain
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_184
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

250895..251530
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E1_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78535.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_185
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

251548..252033
DNA (486bp) protein (162aa)
cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase {ECO:0000313|EMBL:ADQ79136.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ADQ79136.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cytidine deaminase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T342_PALPW
scnpilot_p_inoc_scaffold_29_curated_186
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


252100..253626
DNA (1527bp) protein (509aa)
prolyL-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Proline--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2C1_PALPW
scnpilot_p_inoc_scaffold_29_curated_187
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(253671..253880)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79007.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_188
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(253877..254566)
DNA (690bp) protein (230aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R4_PALPW
ABC transporter; K09812 cell division transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADQ79008.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_189
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(254563..255156)
DNA (594bp) protein (198aa)
phosphoribosyL-amp cyclohydrolase; phosphoribosyL-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31); K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R5_PALPW
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_190
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(255175..256212)
DNA (1038bp) protein (346aa)
asparagine synthetase A (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1]
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Asparagine synthetase A n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YQ79_CAPCC
scnpilot_p_inoc_scaffold_29_curated_191
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(256385..256882)
DNA (498bp) protein (166aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R7_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_192
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(256965..257759)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=2 Tax=Bacteroides salyersiae RepID=I9SJZ3_9BACE
scnpilot_p_inoc_scaffold_29_curated_193
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(257768..259753)
DNA (1986bp) protein (662aa)
OmpA/MotB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2R9_PALPW
ompa/motb domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADQ79013.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_194
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(259767..261014)
DNA (1248bp) protein (416aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2S0_PALPW
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:ADQ79014.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_195
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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261157..262395
DNA (1239bp) protein (413aa)
arabinogalactan endo-1,4-beta-galactosidase; K01224 arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Arabinogalactan endo-1,4-beta-galactosidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L019_HALH1
scnpilot_p_inoc_scaffold_29_curated_196
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(262414..263694)
DNA (1281bp) protein (427aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 132
S-adenosylmethionine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3T9_PALPW
scnpilot_p_inoc_scaffold_29_curated_197
unknown

Not on your lists

comp(263723..263899)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_29_curated_198
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(264054..264629)
DNA (576bp) protein (192aa)
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Superoxide dismutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E9_PALPW
scnpilot_p_inoc_scaffold_29_curated_199
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

264826..265287
DNA (462bp) protein (154aa)
Sporulation domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0F0_PALPW
sporulation domaiN-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:ADQ78309.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_200
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

265291..266049
DNA (759bp) protein (253aa)
Zinc/iron permease id=4916366 bin=GWC2_Nitrospirae-rel_56_14 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Zinc transporter, ZIP family
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_201
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

266095..266517
DNA (423bp) protein (141aa)
OsmC family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T358_PALPW
osmc family protein; K07397 putative redox protein
OsmC family protein {ECO:0000313|EMBL:ADQ79152.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_202
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(266524..266817)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:927 RepID=R5B1Q7_9BACE
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_203
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(266881..269997)
DNA (3117bp) protein (1039aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X2T5_9PORP
cation efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_204
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(270038..271057)
DNA (1020bp) protein (340aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides RepID=C9L375_9BACE
RND family efflux transporter, MFP subunit
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_205
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(271084..272424)
DNA (1341bp) protein (447aa)
Outer membrane efflux protein n=3 Tax=Parabacteroides RepID=A7AKN8_9PORP
outer membrane efflux protein rbh
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_206
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(272431..273093)
DNA (663bp) protein (221aa)
Regulatory protein, TetR family id=4519185 bin=GWF2_Bacteroidetes_35_48 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
regulatory protein TetR
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_207
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

273296..274651
DNA (1356bp) protein (452aa)
Peptidase M20 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0D0_PALPW
peptidase m20
Peptidase M20 {ECO:0000313|EMBL:ADQ78289.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_208
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

274771..275025
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0C9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78288.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_209
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

275090..276421
DNA (1332bp) protein (444aa)
Fmu (Sun) domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0C8_PALPW
fmu (sun) domain protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ADQ78287.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_210
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

276418..277170
DNA (753bp) protein (251aa)
Putative hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0C7_PALPW
hydrolase; K06167 PhnP protein
Putative hydrolase {ECO:0000313|EMBL:ADQ78286.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 181-210 of 330 in total

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