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scnpilot_p_inoc_scaffold_29_curated

Search features with annotation key words

Displaying items 211-240 of 330 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_29_curated_211
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

277185..278240
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T095_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78285.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_212
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

278265..279785
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000361A3AF
NAD metabolism ATPase/kinase {ECO:0000313|EMBL:KHD32834.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_29_curated_213
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(279844..280560)
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein Palpr_0838 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2P6_PALPW
hypothetical protein
Probable transcriptional regulatory protein Palpr_0838 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_214
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(280629..280928)
DNA (300bp) protein (100aa)
50S ribosomal protein L20 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S9_PALPW
LSU ribosomal protein l20p; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_215
unknown

Not on your lists

280998..281096
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_29_curated_216
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(281093..281287)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=9 Tax=Bacteroidales RepID=RL35_PARD8
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
scnpilot_p_inoc_scaffold_29_curated_217
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(281350..281862)
DNA (513bp) protein (171aa)
Translation initiation factor IF-3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S7_PALPW
bacterial translation initiation factor 3 (bif-3); K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_218
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

282073..283851
DNA (1779bp) protein (593aa)
peptidase m24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T439_PALPW
Peptidase M24 {ECO:0000313|EMBL:ADQ79483.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_219
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(284012..285178)
DNA (1167bp) protein (389aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V182_ARCNC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_220
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(285180..287180)
DNA (2001bp) protein (667aa)
CoA-disulfide reductase (EC:1.8.1.14)
NAD(FAD)-dependent dehydrogenase id=4414378 bin=GWF2_Bacteroidetes_40_14 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_29_curated_221
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(287223..288587)
DNA (1365bp) protein (455aa)
thioredoxin (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4991152 bin=GWA2_Bacteroidetes_A19_40_15 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_222
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

288738..290504
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IDT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY35082.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
scnpilot_p_inoc_scaffold_29_curated_223
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

290719..293445
DNA (2727bp) protein (909aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B9633
TonB-dependent receptor plug
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_224
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

293469..294743
DNA (1275bp) protein (425aa)
Putative lipoprotein n=1 Tax=Prevotella sp. CAG:617 RepID=R7P6L2_9BACT
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_225
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

294808..295773
DNA (966bp) protein (322aa)
Ser/Thr phosphatase family protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KR01_9BACE
acid phosphatase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_226
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(295862..297205)
DNA (1344bp) protein (448aa)
Radical SAM domain protein id=4991153 bin=GWA2_Bacteroidetes_A19_40_15 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
radical SAM domain-containing protein; K06871 uncharacterized protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_227
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(297289..297915)
DNA (627bp) protein (209aa)
Methyltransferase type 11 id=3784950 bin=GWF2_Bacteroidetes_41_9 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
type 11 methyltransferase
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_228
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

297962..299041
DNA (1080bp) protein (360aa)
AraC family transcriptional regulator id=4525148 bin=GWF2_Bacteroidetes_40_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
AraC family transcriptional regulator
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_p_inoc_scaffold_29_curated_229
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

299149..300558
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y1E2_9BACT
Tax=RBG_13_Bacteroidetes_46_8_curated
scnpilot_p_inoc_scaffold_29_curated_230
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

300606..302903
DNA (2298bp) protein (766aa)
Exporter of the RND superfamily protein id=4525143 bin=GWF2_Bacteroidetes_40_14 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
exporter of the RND superfamily protein; K07003
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_29_curated_231
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

302909..303670
DNA (762bp) protein (254aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XLE2_9BACT
exporters of the RND superfamily-like protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_29_curated_232
RBG_13_Bacteroidetes_44_24_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

303695..304183
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037A8D11
hypothetical protein
Tax=RBG_13_Bacteroidetes_44_24_curated
scnpilot_p_inoc_scaffold_29_curated_233
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


304320..304673
DNA (354bp) protein (118aa)
30S ribosomal protein S6 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A3_PALPW
SSU ribosomal protein s6p; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_234
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


304677..304946
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A2_PALPW
SSU ribosomal protein s18p; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_235
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


304965..305408
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A1_PALPW
LSU ribosomal protein l9p; K02939 large subunit ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_29_curated_236
unknown

Not on your lists

comp(305420..305635)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_29_curated_237
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

305663..307741
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002EB249F
hypothetical protein; K06888
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_29_curated_238
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(307751..309763)
DNA (2013bp) protein (671aa)
UvrABC system protein B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2U7_PALPW
excinuclease ABC subunit b; K03702 excinuclease ABC subunit B
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_curated_239
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(309823..310011)
DNA (189bp) protein (63aa)
PspC domain protein n=8 Tax=Bacteroides RepID=C3Q4U7_9BACE
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_29_curated_240
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(310138..312828)
DNA (2691bp) protein (897aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase {ECO:0000313|EMBL:ADQ79045.1}; EC=2.4.1.25 {ECO:0000313|EMBL:ADQ79045.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
4-alpha-glucanotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2V1_PALPW
Displaying items 211-240 of 330 in total

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