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scnpilot_p_inoc_scaffold_644_curated_18

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 12695..13183

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B0F4_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 218
  • Evalue 3.70e-54
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB56425.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 218
  • Evalue 5.20e-54
RNA polymerase ECF-type sigma factor,sigma70 superfamily similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 155.0
  • Bit_score: 103
  • Evalue 5.50e-20

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGTTAAACAAAGCAGAGTTCAAACAGATATTCGACAAGTACTTCGATACGATACGAAGCTTCATCTACTATCGCTGTGGCGATGTAGATGCAGCATCCGATATGGCTCAGGATGTATTTATGAAGATATGGGAGAAACGGGAGCAGCTTAATGCATTGGAGTTAAAGCCGTTGCTTTATAAAATTGCAAACGATATGATCATAAGCAGCTATCGGAAGAATAACAGCCGTGTGGATTATGAGCAAAGCATGACAACGCAGGAACAATCTCAGCTATCTCCCGAAGAAGAATTAAATTTTCAGGAACTATCCTCCATGTATGCCAAAGCACTCGAACAGATGCCCGAAATACAACGTGTTGTATTTCTCATGAACAGAAACGATGAAATGAAATATCACGAAATTGCCGAATGTCTGCAACTAAGTGTGAAAGCTGTGGAAAAGCGAATGAGTGGCGCTTTGCAATATCTCAGGGCTCAATTATTATAA
PROTEIN sequence
Length: 163
MLNKAEFKQIFDKYFDTIRSFIYYRCGDVDAASDMAQDVFMKIWEKREQLNALELKPLLYKIANDMIISSYRKNNSRVDYEQSMTTQEQSQLSPEEELNFQELSSMYAKALEQMPEIQRVVFLMNRNDEMKYHEIAECLQLSVKAVEKRMSGALQYLRAQLL*