ggKbase home page

scnpilot_p_inoc_scaffold_644_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_644_curated_1
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

125..601
DNA (477bp) protein (159aa)
Transcriptional regulatory protein n=1 Tax=Porphyromonas cansulci JCM 13913 RepID=S4PJG9_9PORP
Transcriptional regulatory protein {ECO:0000313|EMBL:GAE23706.1}; TaxID=1235813 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 10003.;"
AraC-type DNA-binding domain-containing proteins
scnpilot_p_inoc_scaffold_644_curated_2
Prevotella oris, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

692..925
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=D1QN48_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB33105.1}; TaxID=649760 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oris F0302.;"
scnpilot_p_inoc_scaffold_644_curated_3
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

954..1274
DNA (321bp) protein (107aa)
RteC protein n=4 Tax=Bacteroidales RepID=D4IKL3_9BACT
RteC protein.
RteC protein {ECO:0000313|EMBL:KGN76425.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
scnpilot_p_inoc_scaffold_644_curated_4
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1362..1778)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D3Y6_PREDD
Uncharacterized protein {ECO:0000313|EMBL:KGN67292.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1939..2151
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis F0569 RepID=U2IJP2_PORGN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW20835.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
scnpilot_p_inoc_scaffold_644_curated_6
Alloprevotella tannerae, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2434..2826
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEX71361.1}; TaxID=626522 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella tannerae ATCC 51259.;"
Protein of unknown function (DUF3408).
scnpilot_p_inoc_scaffold_644_curated_7
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2866..3033
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J979_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEN83192.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_8
unknown

Not on your lists

3045..3203
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_644_curated_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3333..4601)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZXK8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY79832.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
putative metal-dependent protease of the PAD1/JAB1 superfamily
scnpilot_p_inoc_scaffold_644_curated_10
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4598..6250)
DNA (1653bp) protein (551aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D6F3_PREDD
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGB29649.1}; Uncharacterized protein {ECO:0000313|EMBL:EGQ12262.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
scnpilot_p_inoc_scaffold_644_curated_11
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6262..6522)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D6F4_PREDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGQ12263.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
scnpilot_p_inoc_scaffold_644_curated_12
Prevotella baroniae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6531..7202)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Prevotella baroniae F0067 RepID=U2P631_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERK39601.1}; TaxID=1115809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella baroniae F0067.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7226..7828)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WHY0_BACOV
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51766.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
scnpilot_p_inoc_scaffold_644_curated_14
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7833..9131)
DNA (1299bp) protein (433aa)
ATP-binding protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D6F6_PREDD
putative ATPase
ATP-binding protein {ECO:0000313|EMBL:EGQ12265.1}; Putative ATPase {ECO:0000313|EMBL:AGB29646.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
scnpilot_p_inoc_scaffold_644_curated_15
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9554..9763)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Prevotella nigrescens F0103 RepID=L9PXE1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELX68319.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
putative trasnmembrane protein found in conjugate transposon
scnpilot_p_inoc_scaffold_644_curated_16
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10359..11435)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3U4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05233.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
putative transposase
scnpilot_p_inoc_scaffold_644_curated_17
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12221..12460
DNA (240bp) protein (80aa)
Dihydrofolate reductase {ECO:0000313|EMBL:AGY54288.1}; EC=1.5.1.3 {ECO:0000313|EMBL:AGY54288.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
Dihydrofolate reductase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q760_9BACT
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12695..13183
DNA (489bp) protein (163aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B0F4_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB56425.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
RNA polymerase ECF-type sigma factor,sigma70 superfamily
scnpilot_p_inoc_scaffold_644_curated_19
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13195..13980
DNA (786bp) protein (262aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z0B6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20132.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_644_curated_20

Not on your lists

14017..16410
DNA (2394bp) protein (798aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YGX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD31688.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_644_curated_21
unknown

Not on your lists

16554..16898
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_644_curated_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17021..17452
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00035D6845
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY40995.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
scnpilot_p_inoc_scaffold_644_curated_23
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17705..18505
DNA (801bp) protein (267aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SPZ5_BACT6
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:GAK37308.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
phosphoesterase PA-phosphatase related protein
scnpilot_p_inoc_scaffold_644_curated_24
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18581..19003
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02101.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_p_inoc_scaffold_644_curated_25
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19052..19489
DNA (438bp) protein (146aa)
Uncharacterized protein n=5 Tax=Porphyromonas gingivalis RepID=T2N924_PORGN
Uncharacterized protein {ECO:0000313|EMBL:ERJ64543.1}; TaxID=1227271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis F0570.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_26
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19683..20957
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362483C
Cation efflux system protein {ECO:0000313|EMBL:GAK37307.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_27
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20978..24121
DNA (3144bp) protein (1048aa)
multidrug transporter AcrB n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382BD86
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:GAK37306.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
cation transport related membrane protein
scnpilot_p_inoc_scaffold_644_curated_28
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24118..25296
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F285D
Uncharacterized protein {ECO:0000313|EMBL:GAK37305.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
scnpilot_p_inoc_scaffold_644_curated_29
unknown

Not on your lists

25309..25599
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_644_curated_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25602..27545
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B2760
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIY56810.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
Displaying items 1-30 of 47 in total

View Taxonomy