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scnpilot_p_inoc_scaffold_20_curated_42

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(55801..56538)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 245.0
  • Bit_score: 301
  • Evalue 2.10e-79
Shikimate dehydrogenase {ECO:0000313|EMBL:ADQ80930.1}; EC=1.1.1.25 {ECO:0000313|EMBL:ADQ80930.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 245.0
  • Bit_score: 301
  • Evalue 9.20e-79
Shikimate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T886_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 245.0
  • Bit_score: 301
  • Evalue 6.60e-79

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 738
ATGATGAAATTCGGATTAATTGGCTATCCTGTCGTACACTCTTTTTCGAAAAAATATTTCACCGAAAAATTTGAAAAAGAAGGCATCGACGCGGTGTATGATTTATACCCGTTGGAACGAATCGAATTGTTTAAGGAGCTGATTGCTTCGCAAACGCTCACCGGGCTGAACGTTACCATCCCGCACAAACAAACCGTCATCCCCTTTCTGGATGAGCTGGATGCTACTGCTGCCGAAATAGGCGCGGTAAATGTAATCAAATTCGGTAGGGACCAGGGCGGGTTGAAGCTCAAAGGATACAACACCGATGCCATCGGCTTTGAAAATTCGATCAAACCCCTGCTGAAGCCCCACTATCGCAAGGCTCTTATTCTCGGCACCGGCGGCGCTTCCAAAGCAATCGATTATGCTCTCCGTAAAAATGGGATCGACACCACATTCGTCTCACGTTCGGGAAGTGCCAATCAACTGGCCTACGGCGACTTAACCCACGAAATGATGAAGGATTTTCCGGTTATAGTCAACTGTACTCCTTTGGGGATGGACCCGGCCATTGAAGGATATCCGGCAATTCCTTATGCCGCTATCGGCTCCGGTCATTTGCTCTACGATGTGGTGTACAAACCGGAAGAAACCGTTTTTCTCCGGAAAGGGAAAGAACAGGGCGCAACCACGATCAACGGATTGGAAATGCTATGGGGACAGGCCGAAGCAGCCTGGAAAATTTGGAATCAATAA
PROTEIN sequence
Length: 246
MMKFGLIGYPVVHSFSKKYFTEKFEKEGIDAVYDLYPLERIELFKELIASQTLTGLNVTIPHKQTVIPFLDELDATAAEIGAVNVIKFGRDQGGLKLKGYNTDAIGFENSIKPLLKPHYRKALILGTGGASKAIDYALRKNGIDTTFVSRSGSANQLAYGDLTHEMMKDFPVIVNCTPLGMDPAIEGYPAIPYAAIGSGHLLYDVVYKPEETVFLRKGKEQGATTINGLEMLWGQAEAAWKIWNQ*