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scnpilot_p_inoc_scaffold_20_curated_184

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 261301..261861

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C6_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 186.0
  • Bit_score: 304
  • Evalue 5.90e-80
ribosome recycling factor; K02838 ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 186.0
  • Bit_score: 304
  • Evalue 1.80e-80
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 186.0
  • Bit_score: 304
  • Evalue 8.30e-80

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAGGACGTAAAACCAATTTTAAAGCATGCGGAAGACAGTATGGAAGGTGCGATTATGTTTCTCGACGAATCGCTGGCTCATATTCGTGCCGGGAAAGCCAATCCCCGCATTTTAGATGGCGTAAAGGTAGATTACTACGGTTCTCATGTGCCTCTGTCGAACGTGGCCACAGTGACCACCCCTGATGCAAAAACCATTACCATCCAGCCCTGGGAGCGGGCCATGATAAGCGTAATTGAAAAAGCAATTCTGAATTCCGACGTAGGTATCACACCCATGAATAATGGCGAGGTTATCCGGTTGGGGATCCCTCCTCTTACCGAAGAGCGGCGCAGGCAGCTGGCAAAACAGGCCAAGCATGAAGGGGAGGAAGCTAAGATTTCGGTTCGTAATGCGCGACGCGATGCGATCGAAAAACTGAAGAAACTGATCAAAGAGGGTTTACCCGAAGATATGGAAAAAGATGCGGAGAATGAAGCTCAGAAAATTCACGACAAGTACATCAAGAAAATCGACGAGATGCTAGCCGATAAAGAAAAGGAAATCATGACAGTATAA
PROTEIN sequence
Length: 187
MQDVKPILKHAEDSMEGAIMFLDESLAHIRAGKANPRILDGVKVDYYGSHVPLSNVATVTTPDAKTITIQPWERAMISVIEKAILNSDVGITPMNNGEVIRLGIPPLTEERRRQLAKQAKHEGEEAKISVRNARRDAIEKLKKLIKEGLPEDMEKDAENEAQKIHDKYIKKIDEMLADKEKEIMTV*