ggKbase home page

scnpilot_p_inoc_scaffold_28_curated_258

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(312102..312845)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 248.0
  • Bit_score: 313
  • Evalue 2.40e-82
tRNA pseudouridine synthase a; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 248.0
  • Bit_score: 311
  • Evalue 2.60e-82
tRNA pseudouridine synthase A n=1 Tax=Bacteroides sp. CAG:702 RepID=R5TWC6_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 248.0
  • Bit_score: 313
  • Evalue 1.70e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides sp. CAG:702 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 744
ATGCGCTGGTTTCTTTATTTGTCGTACAACGGTACAGCTTATCATGGCTGGCAGGTACAGCCCAACGGGATTTCGGTTCAGGAGGTGCTGGAGCGGTCGCTCGCGATTTTATTGCGCCGCCCGGTACCAGTTACAGGGGCCGGACGCACCGACTCGGGAGTTCACGCCCGGTTGATGGTAGCACATTTTGATACTGATTGCGGGTTGCACGACGACTTTCTGCAACGCATGAACAGCCTTTTGCCCAACGATATTGCCGTGCATCGCGTCAGGCAGGTATTGCCCGATGCGCATGCCCGGTTCGATGCCTCGGCCCGTTATTACGAGTATCATGTTCATACCGGGAAGGACGTGTTTAGTGAGAAACGTTCGGTGCGTTTGTATCGAGAGCCCGATTTCGGATTGATGAATCAGGCCGCCACGGTACTGATGGAGTACCGCGATTTCACGAGCTTCAGTAAGTTGCATACCGATGTGAAAACCAACAATTGTAAATTAATCCGGGCAGCGTGGGAACCACGGTCCGGCGGATGGGTATTTGTGATCGGCGCCGATCGTTTTTTGAGAAATATGGTGCGTTCGGTAGTAGGCACTTTGCTGGAAGTTGGATATGGCAGGATGTCGATCGACGATCTGAAAGGGGTGGTCGAAGCCCGGAATCGCTGTAAAGCCGGTGTGTCGATGCCGGCGCATGGGCTTTATCTGACCGATGTGCAGTATCCGGAGAATATTTTTTTAGACTGA
PROTEIN sequence
Length: 248
MRWFLYLSYNGTAYHGWQVQPNGISVQEVLERSLAILLRRPVPVTGAGRTDSGVHARLMVAHFDTDCGLHDDFLQRMNSLLPNDIAVHRVRQVLPDAHARFDASARYYEYHVHTGKDVFSEKRSVRLYREPDFGLMNQAATVLMEYRDFTSFSKLHTDVKTNNCKLIRAAWEPRSGGWVFVIGADRFLRNMVRSVVGTLLEVGYGRMSIDDLKGVVEARNRCKAGVSMPAHGLYLTDVQYPENIFLD*