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scnpilot_p_inoc_scaffold_37_curated_32

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 47021..47599

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7I8H9_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 180.0
  • Bit_score: 218
  • Evalue 5.70e-54
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI06390.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 180.0
  • Bit_score: 218
  • Evalue 8.00e-54
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 180.0
  • Bit_score: 217
  • Evalue 3.10e-54

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Taxonomy

Bacteroides sp. 1_1_14 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGAAGAAAACGGGCTTTTATCGAAACCGATGAATGGGCAGGAAACGATAATCAAATTGAGAGCTGGCGACGAGAATGCATTCTCGGATATCTATAAGCGGCATTGGAGACAGGTTTACAACTTCACGAGATTATATATCAATTCGTCGGCAGAGGTGATGGAGGTGGTGCAGGAAGTTTTCGTGAAATTGTGGGAAACTCGCGAAAGACTTGATGAGACCAAAAATCTGGAAGGGCTTTTGTTCATTATGACACGTAATCTCATCTTCAATCGTTCGCGTAAAAGTTTCAGCGAAGAGGCTTTCAAAATTCAGGCATTGGCTTCGATGGAAAATTCTTATAACATCGACGCCGAAATAGAGGCTAGCGATCTAAAAGAACATATCGACAAAATCGTTTCTCTTATGCCTCCCCGTCGTCGACAGATTTTTCGTATGAGCCGCGAGGAGCATCTAAGCCGCAAAGAAATAGCTCTCCAGTTGGGCATCACCGAAAAGGCCGTAGACCGCAGTCTGGCACTCGCGCTGGATTTTATCAGAGAGCACTTGCCGCTGTTCCTTATTTTCATCGGGTTATGA
PROTEIN sequence
Length: 193
MEENGLLSKPMNGQETIIKLRAGDENAFSDIYKRHWRQVYNFTRLYINSSAEVMEVVQEVFVKLWETRERLDETKNLEGLLFIMTRNLIFNRSRKSFSEEAFKIQALASMENSYNIDAEIEASDLKEHIDKIVSLMPPRRRQIFRMSREEHLSRKEIALQLGITEKAVDRSLALALDFIREHLPLFLIFIGL*