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scnpilot_p_inoc_scaffold_37_curated_73

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 101163..101675

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Bacteroides faecis RepID=UPI000262DF88 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 1.60e-28
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 6.70e-29
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EES66988.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 165.0
  • Bit_score: 133
  • Evalue 3.00e-28

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Taxonomy

Bacteroides sp. 1_1_6 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGTACGAGCATCTATCAGCCGACGGCATGATAGCAGCAGTCTATGCCGGGCAGTTGCCTTACATTCTCAATTTTATAAAAAAGAGAATTGATAATCCTGCCGATGCCGAAGACCTTGCGCAAGATGCATTTGTAAAGTTGCTTGAATACAAACAAATGATTCGTCCGGCAACGCTTCAATCCCTGGTGTTTACTATTGTCCGCAATCAAATTGCAGATTACAGGCGTCGGCATTTCCGTAGGCCGGAACTCTTGTGCGTTGATTACGGAGCTACGCTGCCTGCAGCCGAAACCGCAGATAGCCGCTTGCTTGTGCATGAATTGGCCGGGATGGAACGGGCGGTTGTAAAAGCAATGTCCGGTCGGCGGCGAGCGGTATACCGTCTGCATCGTTATGCCGAGCTGTCGGCTCATGATATTGCGGTTGAACTGAAGTTGAGCAAACGTACTGTCGAAAGTCATTTGCTTGCGGGACGTAAAATGGTAAGAACATTACTTCGACCCTGTATATAA
PROTEIN sequence
Length: 171
MYEHLSADGMIAAVYAGQLPYILNFIKKRIDNPADAEDLAQDAFVKLLEYKQMIRPATLQSLVFTIVRNQIADYRRRHFRRPELLCVDYGATLPAAETADSRLLVHELAGMERAVVKAMSGRRRAVYRLHRYAELSAHDIAVELKLSKRTVESHLLAGRKMVRTLLRPCI*