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scnpilot_p_inoc_scaffold_37_curated_90

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(130123..130581)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24390816 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 140.0
  • Bit_score: 83
  • Evalue 1.70e-13
Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 144.0
  • Bit_score: 74
  • Evalue 4.30e-11
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 140.0
  • Bit_score: 83
  • Evalue 2.40e-13

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Taxonomy

RBG_19FT_COMBO_Aminicenantes_58_17_curated → Aminicenantes → Bacteria

Sequences

DNA sequence
Length: 459
ATGGTGCACGGACTCGTGACACGCATGGTGGGCGATGGCGATGCGGTGAAGGACCTGGTACAGGAGGTGTTTGTAAAGCTGTACCTGCAATTACAGGCCGGCGAGCGGATCGAGTACCCGAAAACCTGGCTCTACCGGGTGGCAACACACGGGGCAATCAACCACCTTTCGAGAACCAGGAAGCATCTGGCAATGGAGGAGGCGATGCACGTAAGCGAGAAGGCCGGCGCCGAACAATTGCTGGAAAGGAGCGACAGGAAAAGGCAGATCGACCGTGCATTGATGAAACTGGAGGAGCGCGACCGGCTGTTGCTGGTGCTGTATGCCGATGGTTTGTCGTACAGGGAAATGGCCGAAATCGGCTCCATCGGGCTTAGTTCGGTAGGCAAACTGCTTTCGAGGGCTATTCAGAAATTTAAAAAAATTGCACAAGATGAAGGAATTGACGTGTTTGAATGA
PROTEIN sequence
Length: 153
MVHGLVTRMVGDGDAVKDLVQEVFVKLYLQLQAGERIEYPKTWLYRVATHGAINHLSRTRKHLAMEEAMHVSEKAGAEQLLERSDRKRQIDRALMKLEERDRLLLVLYADGLSYREMAEIGSIGLSSVGKLLSRAIQKFKKIAQDEGIDVFE*