ggKbase home page

scnpilot_p_inoc_scaffold_85_curated_38

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(68252..70138)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RD04_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 633.0
  • Bit_score: 323
  • Evalue 5.40e-85
Transforming growth factor-beta induced protein IG-H3 {ECO:0000313|EMBL:GAO30833.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 645.0
  • Bit_score: 618
  • Evalue 1.10e-173
secreted/surface protein with fasciclin-like repeats similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 645.0
  • Bit_score: 300
  • Evalue 9.00e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1887
ATGAATAAAAAAATAAAGAAACTAGTTGGTGTAACGCTGATGAGCCTGGCCACCGCAGGAGTTACCTTTACCTCCTGTACCGATGAGCCGCTTATCCTGACCACCTTTGAACAGGAAATGATGGGCGAATACATGGAAAAGCGCCCGGAACAATTCTCGGAATTTATCCGTTTGCTCGATACGACCGAAGTACTTGGTTTGCTGAATGCATATGGGGACTACACCTTGTTTGCCCCCGACAACAATGCAATGCGGGCCTTCTATCAGGCTAAAGGGAAAACATCGTTGAAAGGATTTACCCTCGACACATTAACCAAAATTGCATACGACCACATCATCAAAGGATATGAAGTGCCTACCGAAGAATTCCTCGATGGTTTGTTGCCGTTTTTAACCATGAGCGACCGTTATCTGTCGACCACTTCGCGTCCCATGGCGGGAGCCTTGGTGTATTTCGTCAACGATCAGTCGGCCATCGTATCGCGCGATATTGAAGTAAGCAATGGTATTATTCATGTATTGAATAAAGCCCTGGATCCATCGGTCCTGAATATCGTCAGTGCAATCTCGAACGATGAGCGGTTCGGTCTTTTTACAAAGGCTCTGATGGAAACCGGACTCGATCAGAAATTAATGCTGACCCGCGACGACAGTTATGATGTGAACGATTGGAAAAATAAAATCGACGAAACCTTTATACAAGGAAGTGGCTCGCGCGACGAGCTTCCCCTGTCGCGCAAGTACGGATACACGGTATTGATGGAGAGCGATTCGACCTACGCGACGGTGTACGATATAAGAACGCTCGACGATCTGAAGGCGTATGCAGCAGCCCACGTATACCACGAGAACCCGGCTGATGCCAACGTGAGCGATCCGAAAGATCCGCGCAACAGTTTGTACAAGTTTGTGGCTTATCATCTTTTCGACCGTAAAATGACCTATACGCAGTTTATCGATGCCTACGACACCGATCACATGATTAAAACCTACGATATGTACGAATACATTGAAACTATGAACCCGAACACATTGGTGGAAGTTAAAAAGGAACGTGCATCGGGTGAAACCAATTTATTCAACAAATCGGATGAAACCGGCGAAGTGGTTCGCATCAACAAAAACTACCGCGACAAGGATGCGACTAACGGAGTTTATCATGAAATCGACCGTATTCTGATCTACAATAAACGAGTAGTGGGTGAATTGTCGAGCAAGCGCATCCGTATCGATGCCGCTGCATTTTTCCCGGAGCTCATCAACAACAACATGCGGTATTACGATCCGTCGAAACCGCGTTCGTGGGTATTTCCTCCCAACTATATTAAACGTCTGAAGGCATCGGCTACTACCCGGTTCTGTTACCTCAATGCGTATGGCGGTTACCTCGATTATCAGGGCGATGAAGTGTACCTGATCGGGATGTACGACTTTACCGTGGAAACGCCCCCTATTCCTGCAGGAACTTACGAAATCCGGTTTGGTTATCAGCCAACCGGCGGGCGTGGTGCGGCACAGTTGTACTGGGATGGTGTGCCTTGTGGTATTCCGCTCGACTTGCGTATTCTGGCCAACGATCCGCTGATCGGATACGAGGAACCGGGCGTGAACGCAGAAGATCCCAATGGATTTGAAAATGATAAGATGATGCGGAACCGCGGCTATATGAAAGGTCCGGCTACTTATAAAGACGTATTGGGAGTGTGGTATGGAAAGCGAATCGCGCGAAATAGTCCGCAGTACATACGTCGAATCCTCGGGACATACACCTTCGACAAGGCATCGACGCATTTATTTACTGTAAAAGCTGTTCGTGAAGGGCAGTTCATGTTCGACTTCCTCGAATTTGTACCTCTCGAATTGCTTGAAAACGAAGGAATTGAATAA
PROTEIN sequence
Length: 629
MNKKIKKLVGVTLMSLATAGVTFTSCTDEPLILTTFEQEMMGEYMEKRPEQFSEFIRLLDTTEVLGLLNAYGDYTLFAPDNNAMRAFYQAKGKTSLKGFTLDTLTKIAYDHIIKGYEVPTEEFLDGLLPFLTMSDRYLSTTSRPMAGALVYFVNDQSAIVSRDIEVSNGIIHVLNKALDPSVLNIVSAISNDERFGLFTKALMETGLDQKLMLTRDDSYDVNDWKNKIDETFIQGSGSRDELPLSRKYGYTVLMESDSTYATVYDIRTLDDLKAYAAAHVYHENPADANVSDPKDPRNSLYKFVAYHLFDRKMTYTQFIDAYDTDHMIKTYDMYEYIETMNPNTLVEVKKERASGETNLFNKSDETGEVVRINKNYRDKDATNGVYHEIDRILIYNKRVVGELSSKRIRIDAAAFFPELINNNMRYYDPSKPRSWVFPPNYIKRLKASATTRFCYLNAYGGYLDYQGDEVYLIGMYDFTVETPPIPAGTYEIRFGYQPTGGRGAAQLYWDGVPCGIPLDLRILANDPLIGYEEPGVNAEDPNGFENDKMMRNRGYMKGPATYKDVLGVWYGKRIARNSPQYIRRILGTYTFDKASTHLFTVKAVREGQFMFDFLEFVPLELLENEGIE*