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scnpilot_p_inoc_scaffold_85_curated

Search features with annotation key words

Displaying items 31-60 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_85_curated_31
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50320..54492
DNA (4173bp) protein (1391aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NLW1_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEF87099.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
two-component system sensor histidine kinase/response regulator rbh
scnpilot_p_inoc_scaffold_85_curated_32
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54592..56547
DNA (1956bp) protein (652aa)
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C854_9BACE
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:GAE85766.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
scnpilot_p_inoc_scaffold_85_curated_33
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56651..59146
DNA (2496bp) protein (832aa)
Uncharacterized protein {ECO:0000313|EMBL:KJD34678.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
scnpilot_p_inoc_scaffold_85_curated_34
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

59305..61761
DNA (2457bp) protein (819aa)
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_p_inoc_scaffold_85_curated_35
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61808..63436)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IP64_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAO30836.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
RagB/SusD family protein
scnpilot_p_inoc_scaffold_85_curated_36
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63453..66620)
DNA (3168bp) protein (1056aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RQ41_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:GAO30835.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_p_inoc_scaffold_85_curated_37
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66629..68227)
DNA (1599bp) protein (533aa)
Fasciclin domain protein n=2 Tax=Bacteroidetes RepID=F3XZ48_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO30834.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_85_curated_38
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(68252..70138)
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RD04_9BACE
Transforming growth factor-beta induced protein IG-H3 {ECO:0000313|EMBL:GAO30833.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_85_curated_39
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(70152..71711)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RR48_9BACE
Outer membrane protein {ECO:0000313|EMBL:GAO30832.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
RagB/SusD family protein
scnpilot_p_inoc_scaffold_85_curated_40
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71727..75026)
DNA (3300bp) protein (1100aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6R9D8_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:GAO30831.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_p_inoc_scaffold_85_curated_41
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75054..77627)
DNA (2574bp) protein (858aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO30830.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_42
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77753..78394)
DNA (642bp) protein (214aa)
Semialdehyde dehydrogenase NAD-binding protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L2E7_HALH1
semialdehyde dehydrogenase NAD-binding protein
Semialdehyde dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEE52900.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_85_curated_43
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(78396..78833)
DNA (438bp) protein (146aa)
glyoxalase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174632A
hypothetical protein
Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
scnpilot_p_inoc_scaffold_85_curated_44
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

78987..79769
DNA (783bp) protein (261aa)
mazg family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
MazG family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A6_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_45
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

79781..81787
DNA (2007bp) protein (669aa)
dipeptidyL-peptidase iii (EC:3.4.14.4); K01277 dipeptidyl-peptidase III [EC:3.4.14.4]
Dipeptidyl-peptidase III {ECO:0000313|EMBL:ADQ78997.1}; EC=3.4.14.4 {ECO:0000313|EMBL:ADQ78997.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Dipeptidyl-peptidase III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q3_PALPW
scnpilot_p_inoc_scaffold_85_curated_46
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81793..82377)
DNA (585bp) protein (195aa)
dephosphO-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Dephospho-CoA kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q9_PALPW
scnpilot_p_inoc_scaffold_85_curated_47
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(82364..83701)
DNA (1338bp) protein (446aa)
Ribonuclease BN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T291_PALPW
ribonuclease bn; K07058 membrane protein
Ribonuclease BN {ECO:0000313|EMBL:ADQ78835.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_48
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83715..84590)
DNA (876bp) protein (292aa)
YicC-like domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T294_PALPW
yicc-like domaiN-containing protein
YicC-like domain-containing protein {ECO:0000313|EMBL:ADQ78838.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_49
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

84807..86150
DNA (1344bp) protein (448aa)
pyridoxaL-phosphate dependent trpb-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Tryptophan synthase beta chain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T293_PALPW
scnpilot_p_inoc_scaffold_85_curated_50
bacterium UASB270, Bacteria

Not on your lists

comp(86138..86587)
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK58924.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein; K09790 hypothetical protein id=7200958 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein; K09790 hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_51
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87052..87633
DNA (582bp) protein (194aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Guanylate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T295_PALPW
scnpilot_p_inoc_scaffold_85_curated_52
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87640..89463
DNA (1824bp) protein (608aa)
UPF0313 protein Palpr_0620 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T232_PALPW
radical sam domain protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_53
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

89647..90549
DNA (903bp) protein (301aa)
oxidoreductase; K03340 diaminopimelate dehydrogenase [EC:1.4.1.16]
Diaminopimelate dehydrogenase n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DXX9_9BACE
Meso-diaminopimelate D-dehydrogenase {ECO:0000313|EMBL:GAK37063.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
scnpilot_p_inoc_scaffold_85_curated_54
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(90655..91938)
DNA (1284bp) protein (428aa)
Polysaccharide biosynthesis protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L7_PALPW
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADQ78961.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_55
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(91935..93641)
DNA (1707bp) protein (569aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase n=1 Tax=Thermotoga sp. (strain RQ2) RepID=B1L8I6_THESQ
Asparagine synthase {ECO:0000313|EMBL:ACB08668.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
scnpilot_p_inoc_scaffold_85_curated_56
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(93647..94381)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU95_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42077.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
scnpilot_p_inoc_scaffold_85_curated_57
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(94378..95544)
DNA (1167bp) protein (389aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L6_PALPW
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ78960.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_58
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95551..96465)
DNA (915bp) protein (305aa)
Putative uncharacterized protein id=2921985 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78959.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_59
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

96569..96940
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78958.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_60
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

97015..98004
DNA (990bp) protein (330aa)
Quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L3_PALPW
quinone oxidoreductase, yhdh/yhfp family
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:ADQ78957.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 31-60 of 191 in total

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