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scnpilot_p_inoc_scaffold_85_curated

Search features with annotation key words

Displaying items 151-180 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_85_curated_151
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(210184..212127)
DNA (1944bp) protein (648aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides eggerthii CAG:109 RepID=R5K5B7_9BACE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCY56177.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
polysaccharide biosynthesis protein CapD
scnpilot_p_inoc_scaffold_85_curated_152
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

212256..213074
DNA (819bp) protein (273aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2P1_PALPW
scnpilot_p_inoc_scaffold_85_curated_153
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

213313..214719
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
glucuronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12]
Uronate isomerase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RQY9_9BACE
scnpilot_p_inoc_scaffold_85_curated_154
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214838..215881
DNA (1044bp) protein (348aa)
pfkb domain protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
PfkB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X3_PALPW
PfkB domain protein {ECO:0000313|EMBL:ADQ78717.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_155
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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215893..216561
DNA (669bp) protein (223aa)
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-keto-3-deoxy-phosphogluconate aldolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X2_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_156
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

216580..218115
DNA (1536bp) protein (512aa)
Nitrate/nitrite transporter n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JQF2_9FLAO
Major facilitator transporter {ECO:0000313|EMBL:KFF11840.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
major facilitator transporter; K08191 MFS transporter, ACS family, hexuronate transporter
scnpilot_p_inoc_scaffold_85_curated_157
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(218174..219118)
DNA (945bp) protein (315aa)
GSCFA family protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L892_9BACE
GSCFA family protein {ECO:0000313|EMBL:CDB83738.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
gscfa domain protein
scnpilot_p_inoc_scaffold_85_curated_158
Prevotella sp. CAG:255, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(219124..219708)
DNA (585bp) protein (195aa)
Heavy-metal binding protein n=1 Tax=Prevotella sp. CAG:255 RepID=R5CUD9_9BACT
Heavy-metal binding protein {ECO:0000313|EMBL:CCX70129.1}; TaxID=1262923 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:255.;"
heavy-metal binding protein
scnpilot_p_inoc_scaffold_85_curated_159
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(219766..221955)
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6LF01_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB72822.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
Outer membrane receptor proteins, mostly Fe transport
scnpilot_p_inoc_scaffold_85_curated_160
unknown

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comp(222043..222558)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_85_curated_161
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

222685..223560
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1W4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78708.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_162
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

223575..224525
DNA (951bp) protein (317aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Q4_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_163
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(224576..225808)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362BFDA
Uncharacterized protein {ECO:0000313|EMBL:CCZ10873.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
major facilitator superfamily MFS_1; K08217 MFS transporter, DHA3 family, macrolide efflux protein
scnpilot_p_inoc_scaffold_85_curated_164
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

226494..227726
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYM4_9PORP
Transposase {ECO:0000313|EMBL:BAR52397.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
transposase
scnpilot_p_inoc_scaffold_85_curated_165
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

227738..228250
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3H8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05391.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
kila-n, DNA-binding domain
scnpilot_p_inoc_scaffold_85_curated_166
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

228257..228676
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X3H7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05390.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_167
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

228699..229229
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X3H6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05389.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_p_inoc_scaffold_85_curated_168
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

229649..229882
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVE7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02597.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_169
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

229901..230911
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J471_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99486.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_170
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

230962..231375
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02593.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_171
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

231388..232662
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J469_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99484.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_172
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

232687..232893
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X421_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05067.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_p_inoc_scaffold_85_curated_173
unknown

Not on your lists

comp(233226..233345)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_85_curated_174
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(233377..235554)
DNA (2178bp) protein (726aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X426_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05072.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_85_curated_175
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(236367..236885)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X431_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05077.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_176
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(236899..237483)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X432_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05078.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
traO; conjugal transfer protein TraA
scnpilot_p_inoc_scaffold_85_curated_177
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(237487..238449)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X433_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05079.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
traN; conjugate transposon protein TraN
scnpilot_p_inoc_scaffold_85_curated_178
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(238512..239864)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X434_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05080.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
traM; conjugal transfer protein TraA
scnpilot_p_inoc_scaffold_85_curated_179
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(239857..240132)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X435_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05081.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_180
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(240136..240759)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X436_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05082.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
traK; conjugal transfer protein TraA
Displaying items 151-180 of 191 in total

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