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scnpilot_p_inoc_scaffold_85_curated

Search features with annotation key words

Displaying items 91-120 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_85_curated_91
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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139027..139779
DNA (753bp) protein (251aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E4_PALPW
scnpilot_p_inoc_scaffold_85_curated_92
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(139776..140324)
DNA (549bp) protein (183aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U7_PALPW
biotin/lipoyl attachment domaiN-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADQ78691.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_93
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(140329..141825)
DNA (1497bp) protein (499aa)
carbamoyL-phosphate synthase l chain ATP-binding protein (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADQ78690.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ADQ78690.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U6_PALPW
scnpilot_p_inoc_scaffold_85_curated_94
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(141839..143374)
DNA (1536bp) protein (512aa)
propionyL-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ADQ78689.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ADQ78689.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1U5_PALPW
scnpilot_p_inoc_scaffold_85_curated_95
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(143451..144128)
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=4155084 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein; K07150
Uncharacterized protein {ECO:0000313|EMBL:ADQ78686.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_96
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

144245..147124
DNA (2880bp) protein (960aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78682.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_97
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

147298..147522
DNA (225bp) protein (75aa)
hypothetical protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T6_PALPW
Uncharacterized protein {ECO:0000313|EMBL:ADQ78680.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_98
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

147519..148607
DNA (1089bp) protein (363aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T5_PALPW
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ADQ78679.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_99
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

148604..149368
DNA (765bp) protein (255aa)
thiamine pyrophosphate tpp-binding domaiN-containing protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T4_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_100
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

149372..149920
DNA (549bp) protein (183aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T3_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_101
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(149910..150749)
DNA (840bp) protein (280aa)
(LSU ribosomal protein l11p)-lysine N-methyltransferase (EC:2.1.1.-); K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T2_PALPW
scnpilot_p_inoc_scaffold_85_curated_102
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

150902..152278
DNA (1377bp) protein (459aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T1_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_curated_103
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

152332..153897
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1T0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78674.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_104
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153968..154324)
DNA (357bp) protein (119aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2J5_PALPW
cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADQ78939.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_105
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

154457..155125
DNA (669bp) protein (223aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2J6_PALPW
transcriptional regulator, crp/fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADQ78940.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_106
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

155147..157294
DNA (2148bp) protein (716aa)
Transporter, CPA2 family id=1948300 bin=GWE2_Bacteroidetes_40_15 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
transporter, cpa2 family
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_85_curated_107
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(157295..158017)
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 1
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F5_PALPW
scnpilot_p_inoc_scaffold_85_curated_108
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158246..159679
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Q4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78998.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_109
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(159741..160154)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QYC9_VULM7
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_110
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(160180..160677)
DNA (498bp) protein (166aa)
Rhodanese/sulfurtransferase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL11_KORVE
rhodanese/sulfurtransferase-like protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_111
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(160691..161473)
DNA (783bp) protein (261aa)
Sulfurtransferase id=4125956 bin=GWF2_Bacteroidetes_41_31 species=Ochrobactrum sp. CDB2 genus=Ochrobactrum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
rhodanese domain-containing protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_112
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(161486..162562)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=4125955 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_113
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(162627..163604)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ARX2_MARSH
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_114
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(163642..164127)
DNA (486bp) protein (162aa)
Rhodanese domain protein id=4125952 bin=GWF2_Bacteroidetes_41_31 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
moeB1; molybdopterin biosynthesis protein MoeB
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_115
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(164140..165348)
DNA (1209bp) protein (403aa)
hypothetical protein; K07112 id=14625594 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K07112
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_116
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(165360..165590)
DNA (231bp) protein (77aa)
preprotein translocase subunit TatC n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B7AF9C
SirA-like domain-containing protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_117
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

165771..166466
DNA (696bp) protein (232aa)
Crp/Fnr family transcriptional regulator id=3741751 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_85_curated_118
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

166459..167019
DNA (561bp) protein (187aa)
MscS Mechanosensitive ion channel n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZUJ4_9BACE
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EGJ71159.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_curated_119
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(167021..167911)
DNA (891bp) protein (297aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6P1_PALPW
endonuclease/exonuclease/phosphatase; K06896
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADQ80385.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_85_curated_120
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168025..169023
DNA (999bp) protein (333aa)
Transport system permease protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3C3_PALPW
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ADQ79217.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 91-120 of 191 in total

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