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scnpilot_p_inoc_scaffold_21_curated_247

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(315029..315535)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 164.0
  • Bit_score: 174
  • Evalue 3.40e-41
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 164.0
  • Bit_score: 174
  • Evalue 1.50e-40
Shikimate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5I8_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 164.0
  • Bit_score: 174
  • Evalue 1.10e-40

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
GTGGACGCAACGAGGATTTTTCTAGTAGGGTATATGGGGTCGGGTAAGTCGGCTATGGGCCGGCTGCTGGCCAACCGGCTCGGTTACTGTTTTATTGACCTGGATCAGTATATAGAAGGGAAATTCCATAAAACGATTGCCCAACTTTTCCGGGACGAAGGCGAAGCCGCATTCCGCGAAAAGGAAAGAGCCTGTTTGCGAGAGGTGGGAGAGTTTGAAAAAACAGTGATCGCCACCGGGGGCGGGGCCCCTTGCTTTTTCGACAGTATGGACTACATGAACCGGCAGGGTGTTACTGTTTACCTGAAGTTAAGGCCCGGGCAACTGGTGGAGCGACTGCTGAAGGGAAAGGCAGGAGTGCGTCCGCTCATTCATGGTAAAACCCCCGATGAGTTACTCGTATATATCGAAACGATGCTGGCGCACCGGAGCGGATTTTACGAGAAGGCACAGCGTGTTATCGAGGGAAACGATCGGGAAATCATCGATCGGATCAACGCATTGTGA
PROTEIN sequence
Length: 169
VDATRIFLVGYMGSGKSAMGRLLANRLGYCFIDLDQYIEGKFHKTIAQLFRDEGEAAFREKERACLREVGEFEKTVIATGGGAPCFFDSMDYMNRQGVTVYLKLRPGQLVERLLKGKAGVRPLIHGKTPDELLVYIETMLAHRSGFYEKAQRVIEGNDREIIDRINAL*