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scnpilot_p_inoc_scaffold_21_curated

Search features with annotation key words

Displaying items 1-30 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_curated_1
unknown

Not on your lists

1..894
DNA (894bp) protein (298aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(966..2426)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T302_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79096.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2374..3357)
DNA (984bp) protein (328aa)
Kelch repeat type 1-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T303_PALPW
kelch repeat type 1-containing protein
Kelch repeat type 1-containing protein {ECO:0000313|EMBL:ADQ79097.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_4
unknown

Not on your lists

3562..4266
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_5
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4302..5939)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029ADB4E
Uncharacterized protein {ECO:0000313|EMBL:AHW61343.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_6
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6249..6800)
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=4208340 bin=GWF2_Bacteroidetes_38_335 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_p_inoc_scaffold_21_curated_7
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6853..6987)
DNA (135bp) protein (45aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Divergent AAA domain protein n=1 Tax=Porphyromonas gingivalis JCVI SC001 RepID=T2N7U8_PORGN
Divergent AAA domain protein {ECO:0000313|EMBL:EOA09795.1}; TaxID=1195243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis JCVI SC001.;"
scnpilot_p_inoc_scaffold_21_curated_8
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7095..8144)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q7S6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54561.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_21_curated_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8363..9196)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HFM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CEA16499.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9215..11773)
DNA (2559bp) protein (853aa)
Uncharacterized protein id=2178145 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
unsaturated glucuronylhydrolase rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_21_curated_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11787..12824)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZR65_9PORP
Polysaccharide lyase family 8, super-sandwich domain protein {ECO:0000313|EMBL:EDN85176.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12902..14740)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H842_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92237.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycoside hydrolase 97
scnpilot_p_inoc_scaffold_21_curated_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14791..16179)
DNA (1389bp) protein (463aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase id=4319019 bin=GWF2_Bacteroidetes_42_66 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_21_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16220..18004)
DNA (1785bp) protein (595aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B6J6_9PORP
glycoside hydrolase family protein
scnpilot_p_inoc_scaffold_21_curated_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18028..20199)
DNA (2172bp) protein (724aa)
Parallel beta-helix repeat protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWL0_PEDHD
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:ACU06299.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_p_inoc_scaffold_21_curated_16
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20218..21978)
DNA (1761bp) protein (587aa)
RagB/SusD domain-containing protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CB92_SPHS2
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ81206.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_21_curated_17
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21992..25543)
DNA (3552bp) protein (1184aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CB91_SPHS2
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ81205.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_21_curated_18
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25711..26688)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372C5B5
Uncharacterized protein {ECO:0000313|EMBL:KKB54308.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
Fe2+-dicitrate sensor, membrane component
scnpilot_p_inoc_scaffold_21_curated_19
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26748..27326)
DNA (579bp) protein (193aa)
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KEQ3_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CDB73618.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
scnpilot_p_inoc_scaffold_21_curated_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27352..29643)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TR16_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY71708.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29624..31303)
DNA (1680bp) protein (560aa)
Solute:sodium symporter (SSS) family transporter n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9IER1_BACOV
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EIY71709.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Na+/proline symporter
scnpilot_p_inoc_scaffold_21_curated_22
Prevotella sp. oral taxon 472, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31409..32437)
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PVY3_9BACT
Sugar-binding domain protein {ECO:0000313|EMBL:EEX53449.1}; TaxID=619693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 472 str. F0295.;"
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_21_curated_23
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32566..32778)
DNA (213bp) protein (71aa)
Transcriptional regulator, XRE family n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXR9_9FLAO
XRE family transcriptional regulator {ECO:0000313|EMBL:KIX19985.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
XRE family transcriptional regulator; K07727 putative transcriptional regulator
scnpilot_p_inoc_scaffold_21_curated_24
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32783..33319)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SMP3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27684.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_25
unknown

Not on your lists

33629..33955
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34189..35391
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79267.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_27

Not on your lists

comp(35388..36107)
DNA (720bp) protein (240aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
N-acetylglucosaminyldiphospho-UDP N-acetyl-beta-D-mannosaminyltransferase n=1 Tax=Aquimarina agarilytica RepID=UPI0002898DDD
Uncharacterized protein {ECO:0000313|EMBL:KKO01331.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_21_curated_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36163..37425)
DNA (1263bp) protein (421aa)
UDP-glucose-6 dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
UDP-glucose-6 dehydrogenase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWM7_9BACE
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:KKB48763.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
scnpilot_p_inoc_scaffold_21_curated_29
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37498..38466)
DNA (969bp) protein (323aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDN32802.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDN32802.1};; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W3_WEEVC
scnpilot_p_inoc_scaffold_21_curated_30
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38508..39059)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000378DCEE
hypothetical protein
Tax=CG_Flavo_02
Displaying items 1-30 of 379 in total

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