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scnpilot_p_inoc_scaffold_21_curated

Search features with annotation key words

Displaying items 61-90 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_curated_61
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82618..84837
DNA (2220bp) protein (740aa)
pel; pectate trisaccharide-lyase Pel (EC:4.2.2.22)
Pectate trisaccharide-lyase Pel {ECO:0000313|EMBL:AGF55382.1}; EC=4.2.2.22 {ECO:0000313|EMBL:AGF55382.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Pectate trisaccharide-lyase Pel n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MV42_9CLOT
scnpilot_p_inoc_scaffold_21_curated_62
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

84996..86087
DNA (1092bp) protein (364aa)
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase {ECO:0000313|EMBL:ADQ80949.1}; EC=3.5.3.12 {ECO:0000313|EMBL:ADQ80949.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Agmatine deiminase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A5_PALPW
scnpilot_p_inoc_scaffold_21_curated_63
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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86091..87380
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DGV2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89650.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_64
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

87393..88268
DNA (876bp) protein (292aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A4_PALPW
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADQ80948.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_65
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

88312..88935
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003751207
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42383.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_21_curated_66
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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88957..89892
DNA (936bp) protein (312aa)
esterase/lipase-like protein; K03928 carboxylesterase [EC:3.1.1.1]
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000373EAAC
Esterase/lipase-like protein {ECO:0000313|EMBL:ADB42384.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_21_curated_67
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89896..92316)
DNA (2421bp) protein (807aa)
TonB-dependent receptor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4P4_PALPW
tonb-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADQ79688.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_68
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(92418..93038)
DNA (621bp) protein (207aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_21_curated_69
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(93303..94373)
DNA (1071bp) protein (357aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GFP4_BACFG
Radical SAM additional 4Fe4S-binding domain-containing protein {ECO:0000313|EMBL:EKA88242.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
heme biosynthesis protein
scnpilot_p_inoc_scaffold_21_curated_70
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(94366..94848)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6T8Y7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK04256.1}; TaxID=1410950 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 5.;"
scnpilot_p_inoc_scaffold_21_curated_71
unknown

Not on your lists

comp(94917..95747)
DNA (831bp) protein (277aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_72
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95831..96934)
DNA (1104bp) protein (368aa)
ATPase-like, ParA/MinD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T743_PALPW
ATPase-like, para/mind; K03593 ATP-binding protein involved in chromosome partitioning
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_73
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97002..97748)
DNA (747bp) protein (249aa)
tRNA (guanine-n(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T744_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_74
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(97735..98271)
DNA (537bp) protein (179aa)
Gliding motility-associated lipoprotein GldH n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T745_PALPW
gliding motility-associated lipoprotein gldh
Gliding motility-associated lipoprotein GldH {ECO:0000313|EMBL:ADQ80539.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_75
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98237..99568)
DNA (1332bp) protein (444aa)
PSP1 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T746_PALPW
psp1 domain protein
PSP1 domain protein {ECO:0000313|EMBL:ADQ80540.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_76
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(99575..100732)
DNA (1158bp) protein (386aa)
DNA polymerase iii, delta subunit; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
Putative DNA polymerase III, delta subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T747_PALPW
Putative DNA polymerase III, delta subunit {ECO:0000313|EMBL:ADQ80541.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_77
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100880..102319
DNA (1440bp) protein (480aa)
aminoacyL-histidine dipeptidase (EC:3.4.13.3); K01270 dipeptidase D [EC:3.4.13.-]
Aminoacyl-histidine dipeptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T749_PALPW
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:ADQ80543.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_78
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

102326..103555
DNA (1230bp) protein (410aa)
Metal dependent phosphohydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T762_PALPW
metal dependent phosphohydrolase; K06885
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADQ80556.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_79
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

103653..104705
DNA (1053bp) protein (351aa)
udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D2B7
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_80
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104731..105645
DNA (915bp) protein (305aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ id=3392997 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_81
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

105642..106427
DNA (786bp) protein (262aa)
acyL-(acyL-carrier-protein)--udp-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase id=3392999 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_21_curated_82
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106456..108144
DNA (1689bp) protein (563aa)
glutaminyL-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutaminyl-tRNA synthetase id=3393002 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_21_curated_83
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(108166..108687)
DNA (522bp) protein (174aa)
Putative uncharacterized protein id=3393006 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein; K06940
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_21_curated_84
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

108871..110058
DNA (1188bp) protein (396aa)
serine palmitoyltransferase (EC:2.3.1.29 2.3.1.50)
Serine palmitoyltransferase {ECO:0000313|EMBL:ADQ80916.1}; EC=2.3.1.29 {ECO:0000313|EMBL:ADQ80916.1};; EC=2.3.1.50 {ECO:0000313|EMBL:ADQ80916.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Serine palmitoyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T872_PALPW
scnpilot_p_inoc_scaffold_21_curated_85
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

110144..111760
DNA (1617bp) protein (539aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T871_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ80915.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_86
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(111816..113273)
DNA (1458bp) protein (486aa)
glutamate synthase (nadph), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T898_PALPW
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ADQ80942.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_87
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(113275..114111)
DNA (837bp) protein (279aa)
sulfide dehydrogenase (flavoprotein) subunit sudb (EC:1.8.1.-); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:ADQ80943.1}; EC=1.8.1.- {ECO:0000313|EMBL:ADQ80943.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T899_PALPW
scnpilot_p_inoc_scaffold_21_curated_88
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(114276..115340)
DNA (1065bp) protein (355aa)
Radical SAM protein {ECO:0000313|EMBL:KJF44637.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Coenzyme PQQ synthesis protein E id=4982538 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
heme biosynthesis protein
scnpilot_p_inoc_scaffold_21_curated_89
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(115337..115711)
DNA (375bp) protein (125aa)
id=4303411 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_21_curated_90
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(115805..117028)
DNA (1224bp) protein (408aa)
Proteinase inhibitor I4 serpin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T581_PALPW
proteinase inhibitor i4 serpin; K13963 serpin B
Proteinase inhibitor I4 serpin {ECO:0000313|EMBL:ADQ79875.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 61-90 of 379 in total

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