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scnpilot_p_inoc_scaffold_21_curated

Search features with annotation key words

Displaying items 121-150 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_curated_121
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(153117..153638)
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4L2_PALPW
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_122
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(153652..154188)
DNA (537bp) protein (179aa)
glutathione peroxidase (EC:1.-.-.-); K00432 glutathione peroxidase [EC:1.11.1.9]
glutathione peroxidase n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI000365CA40
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_123
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

154363..155733
DNA (1371bp) protein (457aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_p_inoc_scaffold_21_curated_124
unknown

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comp(155985..156182)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_125
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

156311..156544
DNA (234bp) protein (78aa)
Uncharacterized protein id=4143153 bin=GWF2_Bacteroidetes_39_10 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_p_inoc_scaffold_21_curated_126
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(156643..157980)
DNA (1338bp) protein (446aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
Glutamate dehydrogenase n=3 Tax=Parabacteroides RepID=K5Z1W3_9PORP
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
scnpilot_p_inoc_scaffold_21_curated_127
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158244..159851
DNA (1608bp) protein (536aa)
Indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase id=1846971 bin=GWD2_Bacteroidales_45_23 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_21_curated_128
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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159848..160429
DNA (582bp) protein (194aa)
Indolepyruvate oxidoreductase subunit beta {ECO:0000313|EMBL:CEA16409.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CEA16409.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
indolepyruvate oxidoreductase subunit beta; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003733B79
scnpilot_p_inoc_scaffold_21_curated_129
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

160441..161742
DNA (1302bp) protein (434aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
Phenylacetate--CoA ligase n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EDV1_CHLL2
scnpilot_p_inoc_scaffold_21_curated_130
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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161782..162207
DNA (426bp) protein (142aa)
Amino acid-binding ACT domain protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BHV7_CHLPD
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ABL65984.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
scnpilot_p_inoc_scaffold_21_curated_131
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

162213..163412
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000375C938
GntR family transcriptional regulator {ECO:0000313|EMBL:CEA16412.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_21_curated_132
unknown

Not on your lists

comp(163418..164203)
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_133
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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164455..165015
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP id=3119691 bin=GWF2_Bacteroidetes_39_10 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_p_inoc_scaffold_21_curated_134
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

165055..166245
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:564 RepID=R5M3S2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY86148.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_135
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(166247..167434)
DNA (1188bp) protein (396aa)
Uncharacterized protein {ECO:0000313|EMBL:CEA17059.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Uncharacterized protein id=3941666 bin=GWF2_Bacteroidetes_41_61 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
scnpilot_p_inoc_scaffold_21_curated_136
Prevotella saccharolytica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(167731..170433)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Prevotella saccharolytica F0055 RepID=L1ND22_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKY01231.1}; TaxID=1127699 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella saccharolytica F0055.;"
scnpilot_p_inoc_scaffold_21_curated_137
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

170722..172536
DNA (1815bp) protein (605aa)
YesW n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRE1_OPITP
hypothetical protein
YesW {ECO:0000313|EMBL:ACB74628.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_p_inoc_scaffold_21_curated_138
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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172635..174224
DNA (1590bp) protein (530aa)
hypothetical protein AcelC_24571 id=2749126 bin=GWC2_Pelobacter_58_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
scnpilot_p_inoc_scaffold_21_curated_139

Not on your lists

174297..177299
DNA (3003bp) protein (1001aa)
TonB-dependent receptor plug n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERZ0_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KKN31071.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_21_curated_140

Not on your lists

177323..179014
DNA (1692bp) protein (564aa)
carbohydrate-binding protein SusD n=1 Tax=Rudanella lutea RepID=UPI00037C2D02
Uncharacterized protein {ECO:0000313|EMBL:KKN31070.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_21_curated_141
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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179183..180169
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU30_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99163.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
metallophosphoesterase
scnpilot_p_inoc_scaffold_21_curated_142
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

180231..180659
DNA (429bp) protein (143aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Flavobacterium sp. CF136 RepID=J2JP73_9FLAO
Histidine triad (HIT) protein {ECO:0000313|EMBL:KFF06135.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
histidine triad (HIT) protein
scnpilot_p_inoc_scaffold_21_curated_143
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

180671..182116
DNA (1446bp) protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY18436.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Spore coat assembly protein id=2983813 bin=GWF1_Spirochaetes_51_8 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
spore coat assembly protein
scnpilot_p_inoc_scaffold_21_curated_144
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

182133..183377
DNA (1245bp) protein (415aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=E4TCN2_RIEAD
rmuC; RmuC; K09760 DNA recombination protein RmuC
Uncharacterized protein {ECO:0000313|EMBL:AFD56549.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_p_inoc_scaffold_21_curated_145
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

183407..184192
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A951F
Uncharacterized protein {ECO:0000313|EMBL:CEA17061.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_curated_146
unknown

Not on your lists

184287..184820
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_curated_147
MPI_Anaerolineae_49_20, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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184830..185330
DNA (501bp) protein (167aa)
Tax=MPI_Anaerolineae_49_20
scnpilot_p_inoc_scaffold_21_curated_148
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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185327..186631
DNA (1305bp) protein (435aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB27763.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB27763.1};; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
Uncharacterized protein n=1 Tax=Bacillus cereus VD115 RepID=J8GN10_BACCE
restriction modification system DNA specificity domain protein
scnpilot_p_inoc_scaffold_21_curated_149
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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186690..187022
DNA (333bp) protein (111aa)
Toxin protein of toxin/antitoxin module, HigA family n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WZL5_9FLAO
Toxin protein of toxin/antitoxin module, HigA family {ECO:0000313|EMBL:EMY82612.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
killer suppression protein HigA; K07334 proteic killer suppression protein
scnpilot_p_inoc_scaffold_21_curated_150
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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187035..188138
DNA (1104bp) protein (368aa)
Uncharacterized protein id=2098351 bin=GWE2_Bacteroidetes_39_28 species=Psychroflexus gondwanensis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
XRE family transcriptional regulator
Tax=GWE2_Bacteroidetes_39_28_curated
Displaying items 121-150 of 379 in total

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