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scnpilot_p_inoc_scaffold_788_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_788_curated_1
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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252..917
DNA (666bp) protein (222aa)
Permease, glycerol uptake facilitator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AV07_9BACT
permease, glycerol uptake facilitator
Permease, glycerol uptake facilitator {ECO:0000313|EMBL:EIP98848.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
scnpilot_p_inoc_scaffold_788_curated_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(946..1455)
DNA (510bp) protein (170aa)
Opioid growth factor receptor (OGFr) conserved region n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMF0_SINAD
opioid growth factor receptor
Opioid growth factor receptor (OGFr) conserved region {ECO:0000313|EMBL:AGA29856.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1556..2047
DNA (492bp) protein (164aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Cytosine/adenosine deaminase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKY1_SINAD
cytosine/adenosine deaminase
scnpilot_p_inoc_scaffold_788_curated_4
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2379..3365)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1B0_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61316.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_p_inoc_scaffold_788_curated_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3605..4264
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DJB4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28771.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4330..4941
DNA (612bp) protein (204aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9Z6_SINAD
DNA-directed RNA polymerase subunit sigma24
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA25451.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4935..6728
DNA (1794bp) protein (598aa)
Serine/threonine protein kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9B5_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA25450.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7455..9644)
DNA (2190bp) protein (730aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=2 Tax=Singulisphaera acidiphila RepID=L0DEV8_SINAD
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGA27216.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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10001..10651
DNA (651bp) protein (217aa)
Phosphoheptose isomerase n=2 Tax=Singulisphaera acidiphila RepID=L0DD89_SINAD
phosphoheptose isomerase
Phosphoheptose isomerase {ECO:0000313|EMBL:AGA27217.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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10665..11663
DNA (999bp) protein (333aa)
Transcriptional regulator/sugar kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEG7_SINAD
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AGA27218.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_11
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11671..12081)
DNA (411bp) protein (137aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Burkholderia sp. YI23 RepID=G8ME79_9BURK
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AET92129.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
scnpilot_p_inoc_scaffold_788_curated_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12263..14146)
DNA (1884bp) protein (628aa)
membrane protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2526
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGA30958.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14508..17669)
DNA (3162bp) protein (1054aa)
multidrug transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029B0D47
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGA30954.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17744..19018)
DNA (1275bp) protein (425aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ56_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA30955.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_15
unknown

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comp(20222..20497)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_788_curated_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20662..22584
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DED3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27215.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22752..26183
DNA (3432bp) protein (1144aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0003142838
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27211.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_788_curated_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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29095..30312
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003650480
relaxase/mobilization nuclease
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_p_inoc_scaffold_788_curated_19
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30958..32313
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003762764
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIA95726.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
type IV secretory pathway, VirD4 component
scnpilot_p_inoc_scaffold_788_curated_20
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32713..33744
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5L4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF76066.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_788_curated_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33769..38733
DNA (4965bp) protein (1655aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7N1_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE54389.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_788_curated_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(39595..40839)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17860.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
site-specific recombinase XerD
scnpilot_p_inoc_scaffold_788_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41227..42414
DNA (1188bp) protein (396aa)
Integrase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Z9_NIAKG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEW02371.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 23 items

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