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scnpilot_p_inoc_scaffold_1445_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1445_curated_1
unknown

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3..161
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1445_curated_2
unknown

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173..475
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1445_curated_3
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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472..1899
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00036D76B3
RND transporter {ECO:0000313|EMBL:KJS28038.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
cation efflux system transmembrane protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_p_inoc_scaffold_1445_curated_4
unknown

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1886..5089
DNA (3204bp) protein (1068aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LD28_MAGSM
Copper/silver efflux system, membrane component {ECO:0000313|EMBL:CPR18303.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
scnpilot_p_inoc_scaffold_1445_curated_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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5090..5932
DNA (843bp) protein (281aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00150580}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
formyl transferase domain-containing protein; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QUX3_9PROT
scnpilot_p_inoc_scaffold_1445_curated_6
unknown

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6069..6500
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1445_curated_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6926..9577
DNA (2652bp) protein (884aa)
TrwC protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B0F
Conjugative relaxase domain protein {ECO:0000313|EMBL:EHQ29765.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
conjugative relaxase domain-containing protein
scnpilot_p_inoc_scaffold_1445_curated_8
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9567..9995
DNA (429bp) protein (143aa)
Uncharacterized protein (Fragment) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP07_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81481.1}; Flags: Fragment;; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
scnpilot_p_inoc_scaffold_1445_curated_9
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10275..12065
DNA (1791bp) protein (597aa)
Copper resistance protein A homolog n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAQ4_9DELT
Copper resistance protein A homolog {ECO:0000313|EMBL:CBX27648.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
pcoA; CopA family copper-resistance protein
scnpilot_p_inoc_scaffold_1445_curated_10
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12134..12916
DNA (783bp) protein (261aa)
Copper resistance protein B n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAQ3_9DELT
Copper resistance protein B {ECO:0000313|EMBL:CBX27647.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
Uncharacterized protein involved in copper resistance
scnpilot_p_inoc_scaffold_1445_curated_11
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(13070..13861)
DNA (792bp) protein (264aa)
phosphoribosylamine--glycine ligase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D5BE6
hypothetical protein
Tax=RBG_16_Zixibacteria_53_22_curated
scnpilot_p_inoc_scaffold_1445_curated_12
unknown

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comp(13922..14131)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1445_curated_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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14411..14764
DNA (354bp) protein (118aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHP5_SINAD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA28787.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1445_curated_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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14826..15272
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6D2BC
arsenate reductase
Tax=RBG_16_Chloroflexi_51_9_curated
scnpilot_p_inoc_scaffold_1445_curated_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15269..16375
DNA (1107bp) protein (369aa)
Arsenical-resistance protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIB6_SINAD
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AGA28558.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1445_curated_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16509..16916
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
scnpilot_p_inoc_scaffold_1445_curated_17
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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16913..17656
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YXY7_9BACT
Tax=RBG_16_Gamma2_64_11_curated
scnpilot_p_inoc_scaffold_1445_curated_18

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17667..17933
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM85504.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein ASL7641 id=3552007 bin=GWC2_Proteo_65_14_Ab886 species=Photobacterium profundum genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_1445_curated_19
unknown

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18044..18286
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1445_curated_20

Not on your lists

comp(18400..19398)
DNA (999bp) protein (333aa)
integrase n=1 Tax=Leucothrix mucor RepID=UPI0003B3DAA0
Uncharacterized protein {ECO:0000313|EMBL:KKL76666.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase
scnpilot_p_inoc_scaffold_1445_curated_21
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(19860..20096)
DNA (237bp) protein (79aa)
Putative transcriptional regulator n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QM68_NOSS7
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFY46730.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
scnpilot_p_inoc_scaffold_1445_curated_22
unknown

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20333..20530
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 22 items

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