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scnpilot_p_inoc_scaffold_724_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_724_curated_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(220..3684)
DNA (3465bp) protein (1155aa)
Signal transduction histidine kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D790_SINAD
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGA24735.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_724_curated_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3769..5187)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A676C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30570.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_724_curated_3
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5354..8050
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM78 RepID=J3IEG1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJN23731.1}; Flags: Precursor;; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8061..9524)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFD1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27523.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_724_curated_5
unknown

Not on your lists

comp(9587..10054)
DNA (468bp) protein (156aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_724_curated_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10027..10533)
DNA (507bp) protein (169aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFT7_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27521.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_724_curated_7
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10897..13008
DNA (2112bp) protein (704aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
Catalase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5Q9_RHOVT
scnpilot_p_inoc_scaffold_724_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13042..13887)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_p_inoc_scaffold_724_curated_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13884..14702)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003645ED5
short chain dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
scnpilot_p_inoc_scaffold_724_curated_10
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14715..15755)
DNA (1041bp) protein (347aa)
UPI0003CFBD7E related cluster n=1 Tax=unknown RepID=UPI0003CFBD7E
Dehydrogenase {ECO:0000313|EMBL:ESZ48482.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
scnpilot_p_inoc_scaffold_724_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15752..16615)
DNA (864bp) protein (288aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Uncharacterized protein {ECO:0000313|EMBL:EYR83970.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_p_inoc_scaffold_724_curated_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16619..17422)
DNA (804bp) protein (268aa)
2-dehydro-3-deoxyglucarate aldolase; K01630 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:EXL03029.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_p_inoc_scaffold_724_curated_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18523..21495
DNA (2973bp) protein (991aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8U7_SPHTD
ATPase (AAA+ superfamily)-like protein {ECO:0000313|EMBL:ACZ40240.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
ATPase (AAA+ superfamily)-like protein
scnpilot_p_inoc_scaffold_724_curated_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

21488..21931
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8U8_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40241.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_p_inoc_scaffold_724_curated_15
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21933..23162
DNA (1230bp) protein (410aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KRA5_9ACTO
SMC domain-containing protein
RecF/RecN/SMC N-terminal domain protein {ECO:0000313|EMBL:EKX63296.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
scnpilot_p_inoc_scaffold_724_curated_16
unknown

Not on your lists

23159..23845
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_724_curated_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

23842..26838
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8U9_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ACZ40242.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26845..30603
DNA (3759bp) protein (1253aa)
Helicase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8V0_SPHTD
Helicase domain protein {ECO:0000313|EMBL:ACZ40243.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
helicase domain-containing protein
scnpilot_p_inoc_scaffold_724_curated_19
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30639..32507
DNA (1869bp) protein (623aa)
Putative ATP-dependent endonuclease of the OLD family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KCS3_9FIRM
putative ATP-dependent endonuclease of the OLD family
Putative ATP-dependent endonuclease of the OLD family {ECO:0000313|EMBL:AGL00973.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
scnpilot_p_inoc_scaffold_724_curated_20

Not on your lists

34459..35412
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SKU5_PLABD
Uncharacterized protein {ECO:0000313|EMBL:KKL62873.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_21
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35471..36295
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C564C
Uncharacterized protein {ECO:0000313|EMBL:ELS55873.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_22
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

36292..36690
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJ30_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY58572.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
scnpilot_p_inoc_scaffold_724_curated_23
unknown

Not on your lists

36754..37086
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_724_curated_24
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37182..37526
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KD57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAM50579.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_25
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

37801..38709
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003617D11
parB; probable chromosome partitioning protein ParB
Tax=CSP1_3_Armatimonadetes
scnpilot_p_inoc_scaffold_724_curated_26
unknown

Not on your lists

38786..39004
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_724_curated_27
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

39095..39418
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C564B
type I restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADW68997.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
scnpilot_p_inoc_scaffold_724_curated_28
unknown

Not on your lists

40096..40314
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_724_curated_29
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40355..41761
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5994
Uncharacterized protein {ECO:0000313|EMBL:EQB92436.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
hypothetical protein
scnpilot_p_inoc_scaffold_724_curated_30
unknown

Not on your lists

41758..42000
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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