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scnpilot_p_inoc_scaffold_1063_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1063_curated_1
unknown

Not on your lists

comp(205..1272)
DNA (1068bp) protein (356aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1471..3171)
DNA (1701bp) protein (567aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8V9_SINAD
NAD(FAD)-dependent dehydrogenase
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:AGA25071.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1063_curated_3
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3458..4801)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002E217F9
hypothetical protein
Alr9017 protein {ECO:0000313|EMBL:BAB77503.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
scnpilot_p_inoc_scaffold_1063_curated_4
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4862..5779)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SVX3_9SYNE
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:BAO30173.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1063_curated_5
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5830..6090)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002E191A2
Uncharacterized protein {ECO:0000313|EMBL:ESQ83007.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1063_curated_6
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6364..7452
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R0W8_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK80217.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
scnpilot_p_inoc_scaffold_1063_curated_7
unknown

Not on your lists

7427..7837
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_8
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8067..9680
DNA (1614bp) protein (538aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
N-6 DNA methylase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH10_DESAR
N-6 DNA methylase {ECO:0000313|EMBL:AEB08781.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
scnpilot_p_inoc_scaffold_1063_curated_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9964..11022
DNA (1059bp) protein (353aa)
Restriction modification system DNA specificity domain n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC52
restriction endonuclease S subunit
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_1063_curated_10
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11019..12695
DNA (1677bp) protein (559aa)
Transcriptional regulator n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DJ76_RHOBT
Transcriptional regulator {ECO:0000313|EMBL:EKK02904.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1063_curated_11
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12864..15761
DNA (2898bp) protein (966aa)
deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I8QY30_9THEO
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EIV99907.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
scnpilot_p_inoc_scaffold_1063_curated_12
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15758..16108
DNA (351bp) protein (117aa)
Hydrolase n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y5U6_CLOSH
hydrolase
Uncharacterized protein {ECO:0000313|EMBL:ADW22184.1}; TaxID=743525 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;"
scnpilot_p_inoc_scaffold_1063_curated_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16205..18316
DNA (2112bp) protein (704aa)
Putative Acetyltransferase, contains PIN domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7U1_9BACT
putative acetyltransferase
Putative Acetyltransferase, contains PIN domain {ECO:0000313|EMBL:CBK43437.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_p_inoc_scaffold_1063_curated_14
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18341..18787
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2ANJ8_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:KEG41075.1}; TaxID=66897 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1063_curated_15
Vibrio maritimus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18900..20900)
DNA (2001bp) protein (667aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLP6_PLABD
Putative endoglucanase {ECO:0000313|EMBL:GAL18908.1}; TaxID=990268 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio maritimus.;"
PDZ/DHR/GLGF domain-containing protein
scnpilot_p_inoc_scaffold_1063_curated_16
unknown

Not on your lists

comp(21028..22491)
DNA (1464bp) protein (488aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22693..23076
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000362EEE1
XRE family transcriptional regulator {ECO:0000313|EMBL:KJC54167.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
scnpilot_p_inoc_scaffold_1063_curated_18

Not on your lists

comp(23087..23914)
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN96695.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_1063_curated_19
unknown

Not on your lists

comp(23911..24198)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_20
unknown

Not on your lists

comp(24195..24884)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_21

Not on your lists

25062..25583
DNA (522bp) protein (174aa)
NUMOD4 motif protein n=11 Tax=Acinetobacter baumannii RepID=M4NLW0_ACIBA
Uncharacterized protein {ECO:0000313|EMBL:KKL95177.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1063_curated_22
Mycobacterium phage JoeDirt, Bronlikevirus, Caudovirales, Viruses

Not on your lists

25713..26597
DNA (885bp) protein (295aa)
Gp121 n=1 Tax=Mycobacterium phage JoeDirt RepID=G1BQP1_9CAUD
Gp121 {ECO:0000313|EMBL:AEK07142.1}; TaxID=1034137 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Bronlikevirus.;" source="Mycobacterium phage JoeDirt.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1063_curated_23
unknown

Not on your lists

26669..26875
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_24
unknown

Not on your lists

comp(26966..27127)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1063_curated_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(27184..27777)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI5_9GAMM
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
scnpilot_p_inoc_scaffold_1063_curated_26
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28013..28315)
DNA (303bp) protein (101aa)
2-haloalkanoic acid dehalogenase, type II; K01560 2-haloacid dehalogenase [EC:3.8.1.2]
2-haloalkanoic acid dehalogenase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GX23_9SPHI
HAD family hydrolase {ECO:0000313|EMBL:KGO92268.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_p_inoc_scaffold_1063_curated_27
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28266..28718)
DNA (453bp) protein (151aa)
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2]
Cryptic haloacid dehalogenase 1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1H1_9PLAN
Cryptic haloacid dehalogenase 1 {ECO:0000313|EMBL:EDL61346.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
scnpilot_p_inoc_scaffold_1063_curated_28
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29078..29461)
DNA (384bp) protein (128aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VX57_9CYAN
RNA 2'-phosphotransferase
scnpilot_p_inoc_scaffold_1063_curated_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29612..30076
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL76_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30149.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1063_curated_30

Not on your lists

30073..30684
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A4I7_PELCD
Uncharacterized protein {ECO:0000313|EMBL:KKK63787.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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