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scnpilot_p_inoc_scaffold_1312_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1312_curated_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3..2567
DNA (2565bp) protein (855aa)
Polyketide synthase family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEV0_SINAD
polyketide synthase family protein
Polyketide synthase family protein {ECO:0000313|EMBL:AGA27884.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2564..9019
DNA (6456bp) protein (2152aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030DA495
Polyketide synthase family protein {ECO:0000313|EMBL:AGA27885.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
polyketide synthase family protein
scnpilot_p_inoc_scaffold_1312_curated_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9052..10113
DNA (1062bp) protein (354aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGW0_SINAD
3-oxoacyl-(acyl-carrier-protein) synthase III
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:AGA27886.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10119..11066
DNA (948bp) protein (316aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGG7_SINAD
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGA27888.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11053..12723
DNA (1671bp) protein (557aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGC7_SINAD
acyl-CoA synthetase
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGA27890.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12720..13757
DNA (1038bp) protein (346aa)
3-beta hydroxysteroid dehydrogenase/isomerase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GFJ2_GEOUR
3-beta hydroxysteroid dehydrogenase/isomerase
3-beta hydroxysteroid dehydrogenase/isomerase {ECO:0000313|EMBL:ABQ26197.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
scnpilot_p_inoc_scaffold_1312_curated_7
unknown

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comp(13813..14013)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1312_curated_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14026..14976)
DNA (951bp) protein (317aa)
Acyltransferase 3 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQU0_METS4
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ACA18926.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_p_inoc_scaffold_1312_curated_9
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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15309..16493
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AV43_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:EGF26389.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1312_curated_10
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16512..17363
DNA (852bp) protein (284aa)
TIM-barrel signal transduction protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CAG5_RHOBT
transcriptional regulatory protein Y4PA rbh
TIM-barrel signal transduction protein {ECO:0000313|EMBL:EKK03765.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
scnpilot_p_inoc_scaffold_1312_curated_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17370..18485)
DNA (1116bp) protein (372aa)
Signal transduction histidine kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD43_SINAD
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGA27167.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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18695..19807
DNA (1113bp) protein (371aa)
quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R3U4_PIRSD
Tax=RBG_16_Planctomycetes_64_12_curated
scnpilot_p_inoc_scaffold_1312_curated_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19924..22188
DNA (2265bp) protein (755aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE79_SINAD
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
scnpilot_p_inoc_scaffold_1312_curated_14
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22622..23713
DNA (1092bp) protein (364aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Ferrochelatase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6A6_ISOPI
scnpilot_p_inoc_scaffold_1312_curated_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23888..25057
DNA (1170bp) protein (390aa)
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D951_SINAD
serine phosphatase RsbU, regulator of sigma subunit
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:AGA25186.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1312_curated_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25195..25425)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DI93_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28972.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 16 items

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