ggKbase home page

scnpilot_p_inoc_scaffold_420_curated

Search features with annotation key words

Displaying items 91-120 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_420_curated_91
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116533..117051)
DNA (519bp) protein (173aa)
ogt; Methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI000370B50C
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_p_inoc_scaffold_420_curated_92
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117299..118879)
DNA (1581bp) protein (527aa)
alcohol dehydrogenase; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
putative DNA-3-methyladenine glycosidase II n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B06
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_p_inoc_scaffold_420_curated_93
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(118948..119562)
DNA (615bp) protein (205aa)
Nitroreductase family protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S5P0_9PLAN
Nitroreductase family protein {ECO:0000313|EMBL:EMI21514.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
nitroreductase
scnpilot_p_inoc_scaffold_420_curated_94
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(119624..122731)
DNA (3108bp) protein (1036aa)
Putative membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLN5_SINAD
Putative membrane protein {ECO:0000313|EMBL:AGA29735.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein
scnpilot_p_inoc_scaffold_420_curated_95
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

122995..123909
DNA (915bp) protein (305aa)
Glycosyl transferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGH0_SINAD
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AGA27945.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_96
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123906..124265
DNA (360bp) protein (120aa)
Lipid A biosynthesis domain-containing protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XS62_PARAH
lipid A biosynthesis domain-containing protein
Lipid A biosynthesis domain-containing protein {ECO:0000313|EMBL:AGT10294.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
scnpilot_p_inoc_scaffold_420_curated_97
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

124295..125827
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNP4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30994.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_98
unknown

Not on your lists

comp(125829..126425)
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_99
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(126454..128091)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003780917
peptidase U34 dipeptidase
Tax=BJP_IG2158_Zixibacteria_48_33
scnpilot_p_inoc_scaffold_420_curated_100
RLO_PLX_64_10, Bacteria

Not on your lists

comp(128188..130470)
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E7C71D
FG-GAP repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_p_inoc_scaffold_420_curated_101
unknown

Not on your lists

comp(130787..131170)
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_102
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

131336..133579
DNA (2244bp) protein (748aa)
TPR repeat-containing serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
serine/threonine protein kinase n=1 Tax=Salisaeta longa RepID=UPI0003B639AE
Protein kinase {ECO:0000313|EMBL:AHG88160.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_p_inoc_scaffold_420_curated_103
unknown

Not on your lists

comp(133583..134062)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_104
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

comp(134148..135539)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59EB
Uncharacterized protein {ECO:0000313|EMBL:EOD29592.1, ECO:0000313|EnsemblProtists:EOD29592}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
GJ15566 gene product from transcript GJ15566-RA
scnpilot_p_inoc_scaffold_420_curated_105
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(135925..140970)
DNA (5046bp) protein (1682aa)
Putative membrane-bound dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRQ5_SINAD
membrane-bound dehydrogenase
Putative membrane-bound dehydrogenase {ECO:0000313|EMBL:AGA31066.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_106
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

141255..142931
DNA (1677bp) protein (559aa)
Peroxiredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH08_SINAD
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA28103.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_107
unknown

Not on your lists

comp(142959..143321)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_108
Cyanobium sp. PCC 7001, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

143338..144114
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIM7_9CHRO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY38347.1}; TaxID=180281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. PCC 7001.;"
type 12 methyltransferase
scnpilot_p_inoc_scaffold_420_curated_109
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

144111..145193
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003823399
flavin-dependent dehydrogenase
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:AFY27695.1}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
scnpilot_p_inoc_scaffold_420_curated_110
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

145221..146318
DNA (1098bp) protein (366aa)
Naringenin-chalcone synthase (EC:2.3.1.74)
Naringenin-chalcone synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4233
Tax=RBG_16_Planctomycetes_64_10_curated
scnpilot_p_inoc_scaffold_420_curated_111
unknown

Not on your lists

146420..147484
DNA (1065bp) protein (355aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_112
unknown

Not on your lists

147447..147626
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_113
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(147643..149217)
DNA (1575bp) protein (525aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
type B carboxylesterase; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
carboxylesterase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003644FC6
scnpilot_p_inoc_scaffold_420_curated_114
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150057..150677
DNA (621bp) protein (207aa)
NodS-like protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000362BDBA
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGT74201.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_420_curated_115
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151454..152401
DNA (948bp) protein (316aa)
Putative membrane protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWJ8_9PROT
Putative membrane protein {ECO:0000313|EMBL:EHM02646.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
scnpilot_p_inoc_scaffold_420_curated_116
unknown

Not on your lists

152505..152762
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_117
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

152762..153145
DNA (384bp) protein (128aa)
twitching motility protein PilT n=1 Tax=Salisaeta longa RepID=UPI0003B6DACC
PilT protein domain protein
Tax=CG_Cyano_01
scnpilot_p_inoc_scaffold_420_curated_118
unknown

Not on your lists

comp(153142..153345)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_119
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

153493..154830
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEZ2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27939.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_120
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154984..155598
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003667760
Uncharacterized protein {ECO:0000313|EMBL:KCZ91377.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannaschiana VP2.;"
hypothetical protein
Displaying items 91-120 of 139 in total

View Taxonomy