ggKbase home page

scnpilot_p_inoc_scaffold_420_curated

Search features with annotation key words

Displaying items 121-139 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_420_curated_121
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(155614..156114)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBX3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26742.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_122
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

156319..157716
DNA (1398bp) protein (466aa)
Putative efflux protein, MATE family n=2 Tax=Singulisphaera acidiphila RepID=L0DGE7_SINAD
efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:AGA27915.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_123
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(157735..159333)
DNA (1599bp) protein (533aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM90_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA30499.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_124
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(159428..160669)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZN66_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81758.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
scnpilot_p_inoc_scaffold_420_curated_125
unknown

Not on your lists

comp(160672..160887)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_126
unknown

Not on your lists

comp(160884..161084)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_127
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(161135..163492)
DNA (2358bp) protein (786aa)
Molybdopterin-dependent oxidoreductase alpha subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHD6_SINAD
molybdopterin-dependent oxidoreductase subunit alpha
Molybdopterin-dependent oxidoreductase alpha subunit {ECO:0000313|EMBL:AGA28672.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_128
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(163503..164372)
DNA (870bp) protein (290aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ24_SINAD
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_420_curated_129
unknown

Not on your lists

comp(164660..165934)
DNA (1275bp) protein (425aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_130
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

166399..166905
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6K8_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62919.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_p_inoc_scaffold_420_curated_131
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166902..167933
DNA (1032bp) protein (344aa)
Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C3D0_9GAMM
Membrane protein {ECO:0000313|EMBL:BAP56442.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
scnpilot_p_inoc_scaffold_420_curated_132
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168184..170610
DNA (2427bp) protein (809aa)
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EYF05349.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Metal dependent phosphohydrolase id=4942773 bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
CRISPR-associated helicase Cas3; K07012
scnpilot_p_inoc_scaffold_420_curated_133
unknown

Not on your lists

170929..171519
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_420_curated_134
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171603..172280
DNA (678bp) protein (226aa)
CRISPR-associated Cas5 family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULK6_MYXSD
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:AKF84137.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
CRISPR-associated Cas5 family protein
scnpilot_p_inoc_scaffold_420_curated_135
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172277..174082
DNA (1806bp) protein (602aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SM29_9DELT
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:EYF05347.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CRISPR-associated RAMP Csd1 family protein
scnpilot_p_inoc_scaffold_420_curated_136
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174126..175145
DNA (1020bp) protein (340aa)
CRISPR-associated protein, Csd2 family n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQ53_DESVM
CRISPR-associated protein, Csd2 family {ECO:0000313|EMBL:EYF05346.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CRISPR-associated protein, Csd2 family
scnpilot_p_inoc_scaffold_420_curated_137
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175221..175868
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NYP5_CHRVO
CRISPR-associated RecB family exonuclease Cas4b {ECO:0000313|EMBL:EYF05345.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein; K07464 putative RecB family exonuclease
scnpilot_p_inoc_scaffold_420_curated_138
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175870..176901
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQ55_DESVM
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1
scnpilot_p_inoc_scaffold_420_curated_139
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176920..177201
DNA (282bp) protein (94aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NX05_9BACT
CRISPR-associated protein Cas2; K09951 CRISPR-associated protein Cas2
Displaying items 121-139 of 139 in total

View Taxonomy