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scnpilot_p_inoc_scaffold_936_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_936_curated_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..386)
DNA (384bp) protein (128aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC48_SINAD
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA26430.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1272..2057)
DNA (786bp) protein (262aa)
Hydrolase, TatD family id=4330318 bin=GWF2_Planctomycetes_50_10 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Mg-dependent DNase
Mg-dependent DNase {ECO:0000313|EMBL:AGA77618.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_936_curated_3
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2041..3384)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=4330319 bin=GWF2_Planctomycetes_50_10 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS66875.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
scnpilot_p_inoc_scaffold_936_curated_4
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3384..4322)
DNA (939bp) protein (313aa)
id=4330320 bin=GWF2_Planctomycetes_50_10 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA77620.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_936_curated_5
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4336..6291)
DNA (1956bp) protein (652aa)
Uncharacterized protein id=4330321 bin=GWF2_Planctomycetes_50_10 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
P-loop ATPase
Putative P-loop ATPase {ECO:0000313|EMBL:AGA77621.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_936_curated_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6435..7022)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00038125D6
Alkylated DNA repair protein {ECO:0000313|EMBL:AKF08588.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
oxidoreductase, 2OG-Fe(II) oxygenase family protein
scnpilot_p_inoc_scaffold_936_curated_7
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7135..7959)
DNA (825bp) protein (275aa)
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFH09615.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EFH09615.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
DNA-binding helix-turn-helix protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSV8_9PROT
phage N-6-adenine-methyltransferase
scnpilot_p_inoc_scaffold_936_curated_8
unknown

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comp(8092..9363)
DNA (1272bp) protein (424aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_9
unknown

Not on your lists

comp(9394..10380)
DNA (987bp) protein (329aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_10
unknown

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comp(10377..10730)
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_11
unknown

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comp(10723..12306)
DNA (1584bp) protein (528aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_12
unknown

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comp(12647..13162)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_13
unknown

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comp(13256..13432)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_14
unknown

Not on your lists

comp(13752..14909)
DNA (1158bp) protein (386aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15068..15994)
DNA (927bp) protein (309aa)
ParB-like partition protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRM7_SINAD
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGA31650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15991..16860)
DNA (870bp) protein (290aa)
ATPase involved in chromosome partitioning n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRH9_SINAD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGA31605.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17532..18989
DNA (1458bp) protein (486aa)
Replication initiator protein A n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRJ9_SINAD
replication initiator protein A
Replication initiator protein A {ECO:0000313|EMBL:AGA31607.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_18
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(20207..22765)
DNA (2559bp) protein (853aa)
Conjugal transfer n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W0M1_9CYAN
Conjugal transfer {ECO:0000313|EMBL:ESA36548.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
putative ATP-dependent exoDNAse (exonuclease V) subunit alpha
scnpilot_p_inoc_scaffold_936_curated_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23150..24139)
DNA (990bp) protein (330aa)
antirestriction protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E986D
Uncharacterized protein {ECO:0000313|EMBL:EGE55968.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
scnpilot_p_inoc_scaffold_936_curated_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

24327..25472
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGC0_SINAD
Uncharacterized protein {ECO:0000313|EMBL:AIE83935.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
scnpilot_p_inoc_scaffold_936_curated_21
unknown

Not on your lists

25588..25845
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49BC
scnpilot_p_inoc_scaffold_936_curated_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25846..26343
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49BB
recombinase B
RecB family exonuclease {ECO:0000313|EMBL:AGA31709.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_23
unknown

Not on your lists

26419..26778
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_936_curated_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26866..27198)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHQ1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28216.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27204..28820)
DNA (1617bp) protein (539aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Exonuclease VII, large subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH87_SINAD
exonuclease VII, large subunit
scnpilot_p_inoc_scaffold_936_curated_26
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28891..30366)
DNA (1476bp) protein (492aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
DNA/RNA helicase, superfamily I n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KEF5_9FIRM
DNA/RNA helicase, superfamily I
scnpilot_p_inoc_scaffold_936_curated_27
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30653..32581)
DNA (1929bp) protein (643aa)
Putative ATP-dependent endonuclease of the OLD family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KCS3_9FIRM
putative ATP-dependent endonuclease of the OLD family
Putative ATP-dependent endonuclease of the OLD family {ECO:0000313|EMBL:AGL00973.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
scnpilot_p_inoc_scaffold_936_curated_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(32628..33599)
DNA (972bp) protein (324aa)
Site-specific recombinase XerD n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQH8_SINAD
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGA31704.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_936_curated_29
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(33596..33874)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZH6_PLAL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG70096.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying 29 items

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