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scnpilot_p_inoc_scaffold_1134_curated_20

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: comp(23176..23754)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6Z9_PIRSD similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 194.0
  • Bit_score: 181
  • Evalue 5.90e-43
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 194.0
  • Bit_score: 181
  • Evalue 1.90e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB19202.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 194.0
  • Bit_score: 181
  • Evalue 8.30e-43

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGACGGTCGAGACGTCCAAGAGCCTGCTGGATCGGCTGCGGAGCCGGCCGGACGACCAGATGTCGTGGCGGCGGTTCGCGGGGCTGTACGCGCCCCTGATCCGCCGGTGGCTGGTCGGTCAGGGGACGCCCGATGCCGACGCGGAGGACCTGGCCCAGGAGATCCTGATGGTCATCTTCCGCGAGCTGCCCGGCTTCGACCACAACGGCCGCAAGGGGGCGTTCCGGACCTGGATCCGCACCGTCACGGTCAACCGCCTGCGCGGCTACTGGCGGTCGCGCCGCGTGGGGGCCGTCAGCGGGATGGAGGAGCGCCTGGCCCTGCTGGAAGCCGAGGACGGCGAGCCCGGCCGCGCCTGGGACCGCGAGCACGACGAGCACGTCGTCGCCCAGGTCATGAAGCTGGTCGAGCCCGAGTTCGCCCCCTCCACCTGGCGCGCCTTCCGCCGCACCGTCGTCGACGGCCTATCCGCCGCCGAGGCCGCCGCCGAGCTGGGACTCACGCCCAACGCCGTCCTCATCGCCAAGTCGCGCGTCCTCCGGCGGCTCCGCGAGGAGGTGCGCGGGCTGGTGCCGTGA
PROTEIN sequence
Length: 193
MTVETSKSLLDRLRSRPDDQMSWRRFAGLYAPLIRRWLVGQGTPDADAEDLAQEILMVIFRELPGFDHNGRKGAFRTWIRTVTVNRLRGYWRSRRVGAVSGMEERLALLEAEDGEPGRAWDREHDEHVVAQVMKLVEPEFAPSTWRAFRRTVVDGLSAAEAAAELGLTPNAVLIAKSRVLRRLREEVRGLVP*