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scnpilot_p_inoc_scaffold_1134_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1134_curated_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..1257
DNA (1257bp) protein (419aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
2-isopropylmalate synthase n=2 Tax=Singulisphaera acidiphila RepID=L0DPM5_SINAD
2-isopropylmalate synthase
scnpilot_p_inoc_scaffold_1134_curated_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1306..1917)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPV6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31394.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_3
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2213..3127
DNA (915bp) protein (305aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Comamonas testosteroni RepID=B7WZH4_COMTE
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:KCB40993.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
diguanylate cyclase/phosphodiesterase A protein
scnpilot_p_inoc_scaffold_1134_curated_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3143..4840)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D958_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25196.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4837..5811)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCK2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27109.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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6056..6808
DNA (753bp) protein (251aa)
Membrane protein n=1 Tax=Desmospora sp. 8437 RepID=F5SDP6_9BACL
Membrane protein {ECO:0000313|EMBL:EGK12932.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1134_curated_7
Capronia semiimmersa, Capronia, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(6902..8275)
DNA (1374bp) protein (458aa)
ribonuclease (EC:3.4.24.-); K08300 ribonuclease E [EC:3.1.26.12]
Uncharacterized protein n=1 Tax=Eimeria maxima RepID=U6M0Q2_EIMMA
Capronia semiimmersa strain CBS 27337 unplaced genomic scaffold supercont1.3, whole genome shotgun sequence {ECO:0000313|EMBL:KIW69195.1}; TaxID=5601 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Capronia.;" source="Capronia semiimmersa.;"
scnpilot_p_inoc_scaffold_1134_curated_8
unknown

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8659..9171
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1134_curated_9

Not on your lists

9260..9877
DNA (618bp) protein (206aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
2''-5'' RNA ligase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMN3_SINAD
2'-5' RNA ligase
scnpilot_p_inoc_scaffold_1134_curated_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


9950..11038
DNA (1089bp) protein (363aa)
Protein RecA n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL18_SINAD
protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11141..12898)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DQE9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31138.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_12
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12988..14298)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DEFCC8
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADB17488.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
scnpilot_p_inoc_scaffold_1134_curated_13
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14490..15668
DNA (1179bp) protein (393aa)
SMC domain protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RMF4_ALLVD
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:ADC61212.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
scnpilot_p_inoc_scaffold_1134_curated_14
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15671..16423
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B7A193
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23394.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1134_curated_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16608..17711
DNA (1104bp) protein (368aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIY6_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA29344.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_16
unknown

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17749..17982
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1134_curated_17
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18175..19323
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037CC81F
Uncharacterized protein {ECO:0000313|EMBL:KHD30055.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1134_curated_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19329..21905)
DNA (2577bp) protein (859aa)
serine/threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58EC
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA29367.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_19
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21943..23031)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSV1_SORC5
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
scnpilot_p_inoc_scaffold_1134_curated_20
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23176..23754)
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6Z9_PIRSD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB19202.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
scnpilot_p_inoc_scaffold_1134_curated_21

Not on your lists

23927..24817
DNA (891bp) protein (297aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMM9_SINAD
phosphoribosylaminoimidazolesuccinocarboxamide synthase
scnpilot_p_inoc_scaffold_1134_curated_22

Not on your lists

24854..26008
DNA (1155bp) protein (385aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Chorismate synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN33_SINAD
chorismate synthase
scnpilot_p_inoc_scaffold_1134_curated_23

Not on your lists

26174..26602
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLG3_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48428.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1134_curated_24

Not on your lists

26587..27384
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLG3_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48428.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1134_curated_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27424..27945)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRC8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30926.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28018..29076)
DNA (1059bp) protein (353aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ32_SINAD
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA30925.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29362..30558
DNA (1197bp) protein (399aa)
Transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF73_SINAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA27505.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30634..31917
DNA (1284bp) protein (428aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Singulisphaera acidiphila RepID=L0DB36_SINAD
3-oxoacyl-ACP synthase
scnpilot_p_inoc_scaffold_1134_curated_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

32899..33372
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D833_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA24983.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_p_inoc_scaffold_1134_curated_30
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

33447..34055
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZY84_9PLAN
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
Displaying items 1-30 of 45 in total

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