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scnpilot_p_inoc_scaffold_163_curated

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_163_curated_1
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1010
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W4J5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS43316.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1022..1354
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=2459234 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_163_curated_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1351..1764
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036705ED
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
scnpilot_p_inoc_scaffold_163_curated_4
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2290..2808)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037BC1F1
Uncharacterized protein {ECO:0000313|EMBL:KGJ21503.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_5
unknown

Not on your lists

comp(2808..2930)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_163_curated_6
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3166)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000381EF60
Uncharacterized protein {ECO:0000313|EMBL:KGJ23456.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_7
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3317..3991)
DNA (675bp) protein (225aa)
Peptidase M15 n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H9P8_RHOCA
Peptidase M15 {ECO:0000313|EMBL:KGJ16552.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
peptidase M15A
scnpilot_p_inoc_scaffold_163_curated_8
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4059..4367)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HAF0_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:KGJ21506.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_9
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4401..6323)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000371825B
Uncharacterized protein {ECO:0000313|EMBL:KGJ16550.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_10
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6335..10333)
DNA (3999bp) protein (1333aa)
gene transfer agent (GTA) n=1 Tax=Paracoccus sp. N5 RepID=UPI000381CD1C
Gene transfer agent (GTA) {ECO:0000313|EMBL:KGJ16549.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_11
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10358..10804)
DNA (447bp) protein (149aa)
Peptidase n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H346_RHOCA
Peptidase {ECO:0000313|EMBL:KGJ21509.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_12
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10801..11685)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000369BB64
Beta tubulin, autoregulation binding site {ECO:0000313|EMBL:KGJ16547.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
NlpC/P60 family phage cell wall peptidase
scnpilot_p_inoc_scaffold_163_curated_13
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11682..12308)
DNA (627bp) protein (209aa)
Glycoside hydrolase family 24 n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H594_RHOCA
Glycoside hydrolase family 24 {ECO:0000313|EMBL:KGJ23463.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
glycoside hydrolase family protein
scnpilot_p_inoc_scaffold_163_curated_14
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12370..14220)
DNA (1851bp) protein (617aa)
potassium-transporting ATPase subunit G n=1 Tax=Paracoccus sp. N5 RepID=UPI00036243F2
Potassium ABC transporter ATPase {ECO:0000313|EMBL:KGJ21512.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_15
unknown

Not on your lists

comp(15013..15132)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_163_curated_16
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15451..15618)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8H338_RHOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE85164.1}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).;"
scnpilot_p_inoc_scaffold_163_curated_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15929..16636)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NS84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40594.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_p_inoc_scaffold_163_curated_18
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16734..17540)
DNA (807bp) protein (269aa)
Predicted amidotransfease n=1 Tax=Sagittula stellata E-37 RepID=A3K358_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KCZ57379.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
glutamine amidotransferase; K07008 glutamine amidotransferase
scnpilot_p_inoc_scaffold_163_curated_19
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17884..19599)
DNA (1716bp) protein (572aa)
thiamine pyrophosphate binding domain-containing protein; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
PREDICTED: pyruvate dehydrogenase [ubiquinone]-like n=1 Tax=Ceratitis capitata RepID=UPI000329EBCE
Pyruvate dehydrogenase/acetolactate synthase large subunit {ECO:0000313|EMBL:GAN81939.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
scnpilot_p_inoc_scaffold_163_curated_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19608..21242)
DNA (1635bp) protein (545aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTR1_ACICJ
ferredoxin-dependent glutamate synthase
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:ABQ28993.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
scnpilot_p_inoc_scaffold_163_curated_21
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21527..23515)
DNA (1989bp) protein (663aa)
Phosphoesterase, PA-phosphatase related, putative n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJ26_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO55029.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
PA-phosphatase-like phosphoesterase
scnpilot_p_inoc_scaffold_163_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24741..26084
DNA (1344bp) protein (448aa)
putative Cardiolipin synthetase (Cardiolipin synthase) (CL synthase) cls (EC:2.7.8.-)
Putative Cardiolipin synthetase (Cardiolipin synthase) (CL synthase) cls n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVK7_THIA3
Cardiolipin synthase {ECO:0000313|EMBL:EYR84583.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_p_inoc_scaffold_163_curated_23
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26620..27015
DNA (396bp) protein (132aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H14_POLSJ
Chemotaxis protein CheY {ECO:0000313|EMBL:KDB03886.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
response regulator receiver domain-containing protein
scnpilot_p_inoc_scaffold_163_curated_24
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27076..27825)
DNA (750bp) protein (250aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RKG1_9RHOB
luxI; N-acyl-L-homoserine lactone synthetase-like protein
scnpilot_p_inoc_scaffold_163_curated_25

Not on your lists

27953..29386
DNA (1434bp) protein (478aa)
two component sensor histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9ECT3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM62521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_p_inoc_scaffold_163_curated_26
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29450..29662)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Phaeobacter RepID=I7DZN9_PHAIB
hypothetical protein
Tax=CG_Rhodob_01
scnpilot_p_inoc_scaffold_163_curated_27
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29729..31504)
DNA (1776bp) protein (592aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein id=2536828 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_163_curated_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31544..31963)
DNA (420bp) protein (140aa)
Transcriptional regulator, MerR family id=2536827 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
MerR family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_163_curated_29
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32135..32509)
DNA (375bp) protein (125aa)
Transcriptional regulator, MerR family n=4 Tax=Rhodobacter sphaeroides RepID=A3PI21_RHOS1
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABN75987.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
scnpilot_p_inoc_scaffold_163_curated_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32653..33102
DNA (450bp) protein (150aa)
Thioesterase superfamily protein id=2536824 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying items 1-30 of 170 in total

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